Takahashi Koichi

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Other affiliations (6)：

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Research field (1)： Biological, health, and medical informatics

Research theme for competitive and other funds (4)：

2017 - 2022 Proposal and Demonstration of Asynchronous Parallel Information Processing Architecture Inspired by Brain Information Dynamics
2017 - 2020 全ゲノム規模モデルで迫る細胞内資源問題と持続可能性原理
2013 - 2017 The parallel Green's Function Reaction Dynamics method enables whole signal transduction pathway simulations
2011 - 2016 Small number issues in the genome biology

Papers (69)：

Kozo Nishida, Junichi Maruyama, Kazunari Kaizu, Koichi Takahashi, Katsuyuki Yugi. Transomics2cytoscape: an automated software for interpretable 2.5-dimensional visualization of trans-omic networks. NPJ systems biology and applications. 2024. 10. 1. 16-16
Genki N Kanda, Taku Tsuzuki, Motoki Terada, Noriko Sakai, Naohiro Motozawa, Tomohiro Masuda, Mitsuhiro Nishida, Chihaya T Watanabe, Tatsuki Higashi, Shuhei A Horiguchi, et al. Robotic search for optimal cell culture in regenerative medicine. eLife. 2022. 11. e77007
Naohiro Motozawa, Takuya Miura, Koji Ochiai, Midori Yamamoto, Takaaki Horinouchi, Taku Tsuzuki, Genki N Kanda, Yosuke Ozawa, Akitaka Tsujikawa, Koichi Takahashi, et al. Automated evaluation of retinal pigment epithelium disease area in eyes with age-related macular degeneration. Scientific reports. 2022. 12. 1. 892-892
Takeshi D Itoh, Takaaki Horinouchi, Hiroki Uchida, Koichi Takahashi, Haruka Ozaki. Optimal Scheduling for Laboratory Automation of Life Science Experiments with Time Constraints. SLAS technology. 2021. 26. 6. 24726303211021790-24726303211021790
Koji Ochiai, Naohiro Motozawa, Motoki Terada, Takaaki Horinouchi, Tomohiro Masuda, Taku Kudo, Motohisa Kamei, Akitaka Tsujikawa, Kenji Matsukuma, Tohru Natsume, et al. A Variable Scheduling Maintenance Culture Platform for Mammalian Cells. SLAS TECHNOLOGY: Translating Life Sciences Innovation. 2021. 26. 2. 209-217

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MISC (5)：

新土優樹, Hidetaka Kosako, 佐甲靖志, 高橋恒一. Analog-to-digital Conversion in the Cellular Signaling System. Seibutsu Butsuri. 2016. Vol.56. No.6. 334-336
Design and Development of a Generic Software Platform for Cognitive Computing. The 29th Annual Conference of the Japanese Society for Artificial Intelligence, 2015. 2015. 29. 1-4
Takahashi Koichi. 9pAR-5 Connecting hierarchical levels with simulations. Meeting abstracts of the Physical Society of Japan. 2014. 69. 2. 222-222
IMAI RYOSUKE, KAIZU KAZUNARI, NOZAKI TADASU, MAESHIMA KAZUHIRO, TAKAHASHI KOICHI. 生化学に新たな視点を与える技術の開発とその応用定量的1分子蛍光イメージングと計算機シミュレーションを用いたゲノムダイナミクスの解析. 生化学. 2014. 86. 2. 192-200
Takahashi Koichi, Kaizu Kazunari. 2012 Spatially resolved simulations of cellular biochemical networks. The Computational Mechanics Conference. 2009. 2009. 22. 765-766

Books (1)：

A multi-algorithm, multi-timescale cell biology simulation : requirements analysis, algorithm design, and software implementation
藤沢 : 慶應義塾大学湘南藤沢学会, 2004.6 2004 ISBN:487762130X

Lectures and oral presentations (6)：

上皮成長因子シグナル伝達経路の確率論的な応答
(第35回日本分子生物学会年会 2012)
増殖因子刺激に対するERKの核移行ダイナミクスの生細胞イメージング解析
(第35回日本分子生物学会年会 2012)
Distributed cell biology simulations with E-cell system
(International Workshop on Life Science Grid 2004)
細胞機能全体像のコンピュータシミュレーション:E-CELL プロジェクトの経過報告と将来展望
(第22回日本分子生物学会 1999 Annual Meeting 1999)
"The E-CELL Simulation System: Software Environment for Whole Cell Simula tion"
(Intelligent Systems for Molecular Biology '99 1999)

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Professional career (1)：

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