Rchr
J-GLOBAL ID：200901050764823848   Update date: Apr. 11, 2024

Koyanagi Kanako

コヤナギ カナコ | Koyanagi Kanako
Affiliation and department：
Hokkaido University

About Hokkaido University


Job title： Associate Professor
Homepage URL  (1)： https://www.ist.hokudai.ac.jp/div/bio/en/laboratories/genome-science/
Research field  (3)： Systems genomics ,  Evolutionary biology ,  Genomics
Research keywords  (13)： phylogenetic analysis ,  epigenetics ,  Cell lineage ,  Cell differentiation ,  rice ,  human ,  virus ,  comparative genomics ,  genome organization ,  regulation of gene expression ,  molecular evolution ,  evolution ,  genome
Research theme for competitive and other funds  (12)：
  • 2022 - 2025 Inferring epigenomic changes during cell differentiation at single cell resolution
  • 2016 - 2020 Inferring cell differentiation process based on phylogenetic analysis of histone modifications of human cells
  • 2013 - 2017 Inferring cell differentiation processes based on phylogenetic analysis of genome-wide epigenetic information
  • 2014 - 2016 An analgesic neuropeptide endomorphin may be produced by RNA editing induced by oxidative stress
  • 2013 - 2016 地域の育種集団におけるFNPsハプロタイプを用いた高速ゲノム育種法の開発
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Papers (44)：
  • Kanako O Koyanagi. Inferring chromatin accessibility during murine hematopoiesis through phylogenetic analysis. BMC research notes. 2023. 16. 1. 222-222
  • Nozomi Saito, Sunlu Chen, Katsuya Kitajima, Zhitong Zhou, Yohei Koide, Jaymee R Encabo, Maria Genaleen Q Diaz, Il-Ryong Choi, Kanako O Koyanagi, Yuji Kishima. Phylogenetic analysis of endogenous viral elements in the rice genome reveals local chromosomal evolution in Oryza AA-genome species. Frontiers in plant science. 2023. 14. 1261705-1261705
  • Sunao Sugita, Yoshihiko Usui, Hidemi Watanabe, Laura Panto, Miyabi Iida, Keisuke Suginoshita, Kanako O Koyanagi, Akihiro Nishida, Yasuo Kurimoto, Masayo Takahashi, et al. Adenovirus-associated uveitis with necrotizing retinitis. Ophthalmology. 2022. 130. 4. 443-445
  • Fujino Kenji, Kawahara Yoshihiro, Koyanagi Kanako O., Shirasawa Kenta. Translation of continuous artificial selection on phenotype into genotype during rice breeding programs. Breeding Science. 2021. 71. 2. 125-133
  • Kanako O. Koyanagi. Inferring changes in histone modification during cell differentiation by ancestral state estimation based on phylogenetic trees of cell types: Human hematopoiesis as a model case. Gene. 2019. 721S. 100021-100021
ｍore...
MISC (72)：
  • Zhitong Zhou, Yoshihiro Kawahara, Hidemi Watanabe, Kanako O. Koyanagi. Inferring the evolutionary origins of mutations involved in rice domestication in Japan. 2023
  • 小柳香奈子. オープンクロマチン情報の系統解析による細胞分化過程の推定. 日本遺伝学会大会プログラム・予稿集. 2023. 95th (CD-ROM)
  • 和島史明, 小柳香奈子, 渡邉日出海. An investigation of the heterogeneity in clinically relevant single nucleotide polymorphisms between races. 日本分子生物学会年会プログラム・要旨集(Web). 2022. 45th
  • 杉之下景介, 小柳香奈子, 渡邊日出海. Development of a sequence-independent isothermal amplification method for long-strand DNA. 日本分子生物学会年会プログラム・要旨集(Web). 2022. 45th
  • FUJIWARA Haruto, Koyanagi Kanako O., WATANABE Hidemi. A study of the food habits of the Japanese macaque Macaca fuscata inhabiting in the northernmost nonhuman primate habitat via a metagenomic fecal analysis. Primate Research Supplement. 2022. 38. 64
ｍore...
Books (1)：
  • 進化-分子・個体・生態系
    メディカルサイエンスインターナショナル 2009 ISBN:4895926214
Lectures and oral presentations  (17)：
  • 比較ゲノム解析によるO. sativa ssp. japonicaとイネ属AAゲノム種のイントログレッション領域の探索
    (日本育種学会第145回講演会 2024)
  • オミクス情報の系統解析による細胞分化過程推定の可能性
    (第46回日本分子生物学会年会 フォーラム1F-15「ゲノム起源を討論する学問所」 2023)
  • オープンクロマチン情報の系統解析による細胞分化過程の推定
    (日本遺伝学会第95回大会 2023)
  • エピゲノム情報の系統解析による細胞分化過程の推定
    (遺伝研研究集会「生命科学を支える分子系統学」 2022)
  • Inferring cell differentiation processes based on phylogenetic analysis of epigenomes
    (The 24th Hokkaido University - Seoul National University Joint Symposium 2021)
ｍore...
Professional career (1)：
  • PhD (Kyoto University)
Work history (6)：
  • 2019 - 現在 Hokkaido University Faculty of Information Science and Technology Associate Professor
  • 2007 - 2019 Hokkaido University Graduate School of Information Science and Technology Associate Professor
  • 2004 - 2007 Hokkaido University Graduate School of Information Science and Technology Associate Professor
  • 2003 - 2004 Nara Institute of Science and Technology Information Science Assistant Professor
  • 2001 - 2003 Japan Biological Information Research Center Postdoctoral researcher
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Committee career (3)：
  • 2021 - 2022 日本遺伝学会第94回大会実行委員
  • 2016 - 2019 日本進化学会 2019年大会準備委員
  • 2016 - 2017 IIBMP2017 実行委員
Awards (2)：
  • 2021 - 公益財団法人 秋山記念生命科学振興財団 研究助成〈一般〉 リアルタイム選別による未知DNA配列解読-北海道イネゲノム難解読領域への応用-
  • 2005 - 日本遺伝学会 第77回日本遺伝学会BP賞 脊椎動物特異的なゲノム構造進化の発見
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