Research field (4)：
Molecular biology
, Biophysics
, Structural biochemistry
, Bio-, chemical, and soft-matter physics
Research keywords (2)：
タンパク質デザイン
, バイオインフォマティックス
Research theme for competitive and other funds (1)：
2009 - 2010 人工タンパク質の設計
Papers (14)：
Wataru Nishima, Dylan Girodat, Mikael Holm, Emily J Rundlet, Jose L Alejo, Kara Fischer, Scott C Blanchard, Karissa Y Sanbonmatsu. Hyper-swivel head domain motions are required for complete mRNA-tRNA translocation and ribosome resetting. Nucleic acids research. 2022. 50. 14. 8302-8320
Wataru Nishima, Marta Kulik. Full-Length Computational Model of the SARS-CoV-2 Spike Protein and Its Implications for a Viral Membrane Fusion Mechanism. Viruses. 2021. 13. 6
Jaewoon Jung, Wataru Nishima, Marcus Daniels, Gavin Bascom, Chigusa Kobayashi, Adetokunbo Adedoyin, Michael E. Wall, Anna Lappala, Dominic Phillips, William Fischer 0001, et al. Scaling molecular dynamics beyond 100, 000 processor cores for large-scale biophysical simulations. Journal of Computational Chemistry. 2019. 40. 21. 1919-1930
Anna Lappala, Wataru Nishima, Jacob Miner, Paul Fenimore, Will Fischer, Peter Hraber, Ming Zhang, Benjamin McMahon, Chang-Shung Tung. Structural Transition and Antibody Binding of EBOV GP and ZIKV E Proteins from Pre-Fusion to Fusion-Initiation State. Biomolecules. 2018. 8. 2
Suyong Re, Shigehisa Watabe, Wataru Nishima, Eiro Muneyuki, Yoshiki Yamaguchi, Alexander D MacKerell Jr, Yuji Sugita. Characterization of Conformational Ensembles of Protonated N-glycans in the Gas-Phase. Scientific reports. 2018. 8. 1. 1644-1644
