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J-GLOBAL ID:201401048480825544   Update date: Feb. 13, 2024

Shinomiya Kazunori

シノミヤ カズノリ | Shinomiya Kazunori
Affiliation and department:
Job title: Research Scientist
Research field  (1): Neuroscience - general
Research keywords  (11): connectome ,  vision ,  insect ,  brain ,  enhancer trap ,  neuronal circuits ,  neuroanatomy ,  connectomics ,  visual system ,  electron microscopy ,  Drosophila
Research theme for competitive and other funds  (1):
  • 2007 - 2009 キイロショウジョウバエ脳を用いた感覚統合を担う神経回路の探索
Papers (13):
  • Zhiyuan Lu, C. Shan Xu, Kenneth J. Hayworth, Song Pang, Stephen M. Plaza, Louis K. Scheffer, Gerald M. Rubin, Harald F. Hess, Patricia K. Rivlin, Ian A. Meinertzhagen. En bloc preparation of Drosophila brains enables high-throughput FIB-SEM connectomics. Frontiers in Neural Circuits. 2022. 16
  • Kazunori Shinomiya, Aljoscha Nern, Ian A. Meinertzhagen, Stephen M. Plaza, Michael B. Reiser. Neuronal circuits integrating visual motion information in Drosophila. Current Biology. 2021. 32. 16. 3529-3544.e2
  • Louis K Scheffer, C Shan Xu, Michal Januszewski, Zhiyuan Lu, Shin-Ya Takemura, Kenneth J Hayworth, Gary B Huang, Kazunori Shinomiya, Jeremy Maitlin-Shepard, Stuart Berg, et al. A connectome and analysis of the adult Drosophila central brain. eLife. 2020. 9
  • Kazunori Shinomiya, Gary Huang, Zhiyuan Lu, Toufiq Parag, C Shan Xu, Roxanne Aniceto, Namra Ansari, Natasha Cheatham, Shirley Lauchie, Erika Neace, et al. Comparisons between the ON- and OFF-edge motion pathways in the Drosophila brain. eLife. 2019. 8
  • Kazunori Shinomiya, Jane Anne Horne, Sari McLin, Meagan Wiederman, Aljoscha Nern, Stephen M Plaza, Ian A Meinertzhagen. The Organization of the Second Optic Chiasm of the Drosophila Optic Lobe. Frontiers in neural circuits. 2019. 13. 65-65
more...
MISC (8):
  • Shin-ya Takemura, Kenneth Hayworth, Gary Huang, Michal Januszewski, Zhiyuan Lu, Elizabeth Marin, Stephan Preibisch, C. Shan Xu, John Bogovic, Andrew Champion, et al. A Connectome of the Male Drosophila Ventral Nerve Cord. 2023
  • Janne K. Lappalainen, Fabian D. Tschopp, Sridhama Prakhya, Mason McGill, Aljoscha Nern, Kazunori Shinomiya, Shin-ya Takemura, Eyal Gruntman, Jakob H. Macke, Srinivas C. Turaga. Connectome-constrained deep mechanistic networks predict neural responses across the fly visual system at single-neuron resolution. 2023
  • Jingpeng Wu, Yicong Li, Nishika Gupta, Kazunori Shinomiya, Pat Gunn, Alexey Polilov, Hanspeter Pfister, Dmitri Chklovskii, Donglai Wei. An Out-of-Domain Synapse Detection Challenge for Microwasp Brain Connectomes. 2023
  • Ting Zhao, Shin-ya Takemura, Gary B. Huang, Jane Anne Horne, William T. Katz, Kazunori Shinomiya, Louis K. Scheffer, Ian A. Meinertzhagen, Patricia K. Rivlin, Stephen M. Plaza. Large-scale EM Analysis of the Drosophila Antennal Lobe with Automatically Computed Synapse Point Clouds. 2015
  • Kazunori Shinomiya, Keiji Matsuda, Takao Oishi, Kei Ito. Flybrain Neuron Database, a comprehensive online database of the Drosophila brain neurons. NEUROSCIENCE RESEARCH. 2009. 65. S134-S134
more...
Books (2):
  • Decoding Neural Circuit Structure and Function: Cellular Dissection Using Genetic Model Organisms
    Springer 2017 ISBN:3319573624
  • Decoding neural circuit structure and function : cellular dissection using genetic model organisms
    Springer 2017 ISBN:9783319573625
Lectures and oral presentations  (12):
  • Visualization of organelles and ultrastructure in the fly brain using three-dimensional electron microscopy (3D-EM)
    (NEURO2019 2019)
  • Connectome-based compartmentalization of the fly brain
    (Max Planck/HHMI Connectomics Meeting Berlin 2019 2019)
  • Reconstructing the motion processing circuit in the fruit fly brain
    (Max Planck/HHMI Connectomics Meeting Berlin 2017 2017)
  • Reconstruction of ON- and OFF-Edge Motion Detection Circuits in the Drosophila Optic Lobe Using the FIB-SEM Technique
    (16th European Neurobiology of Drosophila Conference 2016)
  • Reconstruction of visual circuits in the optic lobe using electron microscopy-based connectomics techniques
    (3rd Asia-Pacific Drosophila Research Conference 2015)
more...
Education (5):
  • 2010 - PhD (Science)
  • 2007 - 2010 University of Tokyo Graduate School of Frontier Sciences PhD course, Department of Computational Biology
  • 2005 - 2007 University of Tokyo Graduate School of Frontier Sciences Master Course, Department of Computational Biology
  • 2003 - 2005 University of Tokyo Faculty of Science Department of Biology (Zoology)
  • 2001 - 2003 University of Tokyo College of Arts and Sciences Natural Sciences II, Junior Division
Professional career (1):
  • PhD (Science) (University of Tokyo)
Work history (6):
  • 2021/08 - 現在 Simons Foundation Flatiron Institute Research Scientist
  • 2014/10 - 2021/08 Howard Hughes Medical Institute Janelia Research Campus Research Scientist
  • 2011/07 - 2014/10 Dalhousie University Department of Psychology and Neuroscience Postdoctoral Fellow
  • 2011/07 - 2012/06 Government of Canada Post-Doctoral Research Fellowships(PDRF)
  • 2010/04 - 2011/06 University of Tokyo Institute of Molecular and Cellular Biosciences Postdoctoral Fellow
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Awards (1):
  • 2016/02 - Kazato Research Foundation Kazato Research Encouragement Prize
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