Rsrc
J-GLOBAL ID：201510093419033845
Research Resource code：NBDC01432
Update date：Mar. 10, 2015
ANISEED: Ascidian Network of In Situ Expression and Embryological Data
ANISEED: Ascidian Network of In Situ Expression and Embryological Data
Owning Organization：
-
Institut de Biologie du Développement de Marseille
Resource classification：
Data,Database
Tag (subject) (1)：
Genome/Gene
Tag (data type) (4)：
Sequence
, Expression
, Image/Movie
, Bibliography/Documents
Species (7)：
Botryllus schlosseri (NCBI Taxonomy ID: 30301)
, Ciona intestinalis (NCBI Taxonomy ID: 7719)
, Ciona savignyi (NCBI Taxonomy ID: 51511)
, Halocynthia aurantium (NCBI Taxonomy ID: 254849)
, Halocynthia roretzi (NCBI Taxonomy ID: 7729)
, Phallusia fumigata (NCBI Taxonomy ID: 395376)
, Phallusia mammillata (NCBI Taxonomy ID: 59560)
Overview：
ANISEED is a database about gene expression in Ascidian embryos. It contains detailed anatomical ontologies for Ascidian embryos, and quantitative geometrical descriptions of developing cells obtained from reconstructed three-dimensional (3D) embryos up to the gastrula stages. In this database, fully annotated gene model sets are linked to high-resolution spatial gene expression patterns in wild-type and experimentally manipulated conditions and to experimentally validated cis-regulatory regions imported from specialized databases or extracted from literature articles. This database allows searches using following categories:
1) Genome Annotations (genes, cDNA clones, cis-regulatory regions)
2) Anatomy (anatomical ontology, embryo scheme)
3) gene Expression & Function (expression data, phenotypes)
4) Literature.
It also allows exploration by BLAST or genome browser.
Source：
NBDC
Record maintainer：
Integbio Database Catalog
Record license：
Creative Commons CC0 license
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