神谷成敏

カミヤナルトシ | Kamiya Narutoshi

所属機関・部署：
職名：特任教授

研究分野 (1件)：生物物理学

競争的資金等の研究課題 (10件)：

全件表示

論文 (71件)：

Gert-Jan Bekker, Yoshifumi Fukunishi, Junichi Higo, Narutoshi Kamiya. Binding Mechanism of Riboswitch to Natural Ligand Elucidated by McMD-Based Dynamic Docking Simulations. ACS Omega. 2024
Ryo Kanada, Atsushi Tokuhisa, Yusuke Nagasaka, Shingo Okuno, Koichiro Amemiya, Shuntaro Chiba, Gert-Jan Bekker, Narutoshi Kamiya, Koichiro Kato, Yasushi Okuno. Enhanced Coarse-Grained Molecular Dynamics Simulation with a Smoothed Hybrid Potential Using a Neural Network Model. Journal of Chemical Theory and Computation. 2023
Gert-Jan Bekker, Nobutaka Numoto, Maki Kawasaki, Takahiro Hayashi, Saaya Yabuno, Yuko Kozono, Takeyuki Shimizu, Haruo Kozono, Nobutoshi Ito, Masayuki Oda, et al. Elucidation of binding mechanism, affinity and complex structure between mWT1 tumor-associated antigen peptide and HLA-A*24:02. Protein Science. 2023. 32. 10. e4775
Gert-Jan Bekker, Mitsugu Araki, Kanji Oshima, Yasushi Okuno, Narutoshi Kamiya. Mutual induced-fit mechanism drives binding between intrinsically disordered Bim and cryptic binding site of Bcl-xL. Communications Biology. 2023. 6. 1. 349
Junichi Higo, Gert-Jan Bekker, Narutoshi Kamiya, Ikuo Fukuda, Yoshifumi Fukunishi. Binding free-energy landscapes of small molecule binder and non-binder to FMN riboswitch: All-atom molecular dynamics. Biophysics and Physicobiology. 2023

MISC (6件)：

Gert-Jan Bekker, Narutoshi Kamiya. Thermal Stability Estimation of Single Domain Antibodies Using Molecular Dynamics Simulations. Computer-Aided Antibody Design. 2023. 151-163
Gert-Jan Bekker, Narutoshi Kamiya. Dynamic Docking Using Multicanonical Molecular Dynamics: Simulating Complex Formation at the Atomistic Level. Methods in Molecular Biology. 2021. 187-202
Masayuki Oda, Nobutaka Numoto, Gert-Jan Bekker, Narutoshi Kamiya, Fusako Kawai. Cutinases from thermophilic bacteria (actinomycetes): From identification to functional and structural characterization. Methods in Enzymology. 2021. 159-185
神谷成敏. 分子動力学シミュレーションによる単一ドメイン抗体の熱安定性の評価. 熱測定. 2020. 47. 4
白木琢磨, 神谷成敏, 陣上久人. 内在性リガンドの結合様式からみた核内受容体PPARγの活性化機構. 蛋白質核酸酵素. 2005. 50. 13. 1660-1665

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神谷 成敏