ラミロフスキージョーダン

ジョーダンラミロフスキー | RAMILOWSKI Jordan A.

所属機関・部署：
職名：教授
その他の所属（所属・部署名・職名） (1件)：

理化学研究所横浜キャンパス統合生命医科学研究センター

ホームページURL (1件)： https://www-user.yokohama-cu.ac.jp/~bioinfo/

研究分野 (2件)：分子生物学 , ゲノム生物学

研究キーワード (13件)： bioinformatics , immunology , cell differentiation , cell-cell communication , transcriptomics , Artificial Intelligence , RNA structure , RNA interactions , single cell , genome structure , chromatin , long non-coding RNAs , NGS data analysis (RNA-seq, CAGE, Hi-C, ChIP, Hi-C, ATAC-seq)

競争的資金等の研究課題 (2件)：

2023 - 2025 転写因子・液-液相分離依存性クロマチンドメインによる免疫細胞分化制御
2021 - 2024 単核貪食細胞系の生体内分化におけるクロマチン高次構造変化とその意義の解析

論文 (29件)：

Jessica Severin, Saumya Agrawal, Jordan A Ramilowski, Ruslan Deviatiiarov, Jay W Shin, Piero Carninci, Michiel de Hoon. ZENBU-Reports: a graphical web-portal builder for interactive visualization and dissemination of genome-scale data. NAR genomics and bioinformatics. 2023. 5. 3. lqad075
Yoshihiro Aizawa, Kentaro Takada, Jun Aoyama, Daisuke Sano, Shoji Yamanaka, Masahide Seki, Yuta Kuze, Jordan A. Ramilowski, Ryo Okuda, Yasuharu Ueno, et al. Establishment of experimental salivary gland cancer models using organoid culture and patient-derived xenografting. Cellular Oncology. 2023. 46. 2. 409-421
Chi Wai Yip, Chung-Chau Hon, Kayoko Yasuzawa, Divya M. Sivaraman, Jordan A. Ramilowski, Youtaro Shibayama, Saumya Agrawal, Anika V. Prabhu, Callum Parr, Jessica Severin, et al. Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types. Cell Reports. 2022. 41. 13. 111893-111893
Ryosuke Jikuya, Koichi Murakami, Akira Nishiyama, Ikuma Kato, Mitsuko Furuya, Jun Nakabayashi, Jordan A. Ramilowski, Haruka Hamanoue, Kazuhiro Maejima, Masashi Fujita, et al. Single-cell transcriptomes underscore genetically distinct tumor characteristics and microenvironment for hereditary kidney cancers. iScience. 2022. 25. 6. 104463-104463
Luca Ducoli, Saumya Agrawal, Chung-Chau Hon, Jordan A. Ramilowski, Eliane Sibler, Michihira Tagami, Masayoshi Itoh, Naoto Kondo, Imad Abugessaisa, Akira Hasegawa, et al. The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background. BMC Genomic Data. 2021. 22. 1. 33-33

講演・口頭発表等 (12件)：

Regulation of myelopoiesis by transcribed enhancers long-noncoding RNAs (e-lncRNAs)
(46th Molecular Biology Society Meeting 2023)
tidyverse: one-stop solution for data mingling in R
(Karolinska Institutet - RIKEN Joint International Doctoral Course 2023 2023)
Coordinated expression of long noncoding-RNA regulates lineage commitment of classical dendritic cells
(The NUS-Kanagawa Cancer Symposium 2023)
Genomics for Beginners Seminar: Uncovering Cell-Cell Communication with Network Analysis Tools
(Hiroshima University 2021)
From RIKEN to a University in Japan: How to smoothly make the transition and what to expect
(RIKEN Career Development Seminar 2021)

学歴 (2件)：

2004 - 2010 Utah State University, US Chemistry and Biochemistry PhD (Physical Chemistry)
1997 - 2002 Silesian University of Technology, Poland MSc Eng (Organic Chemistry, 5-year curriculum)

学位 (2件)：

PhD Physical Chemistry (Utah State University )
MSc Eng (Silesian University of Technology)

経歴 (9件)：

2024/04 - 現在横浜市立大学先端医科学研究センター教授
2020/08 - 現在特定国立研究開発法人理化学研究所
2020/08 - 2024/03 横浜市立大学先端医科学研究センター准教授
2016/02 - 2020/08 特定国立研究開発法人理化学研究所
2011/11 - 2016/01 特定国立研究開発法人理化学研究所

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受賞 (11件)：

2021 - Yokohama City University Presidents Office 5th Strategic Research Promotion Project (2021-2023)
2018 - Nature Genetics HUGO Genome Meeting 2018 Outstanding Presentation Award
2018 - RIKEN President Office RIKEN President Letter of Appreciation for Outstanding HUGO Presentation
2015 - Mammalian Genome Conference 29th International Mammalian Genome Conference Outstanding Presentation Award
2015 - RIKEN Presidents Office RIKEN President Letter of Appreciation for IMGC Outstanding Presentation

全件表示

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