Shuya Kato, Seiji Arakaki, Atsushi J Nagano, Kiyoshi Kikuchi, Shotaro Hirase. Genomic landscape of introgression from the ghost lineage in a gobiid fish uncovers the generality of forces shaping hybrid genomes. Molecular ecology. 2023
Shotaro Hirase, Masashi Sekino, Motoyuki Hara, Kiyoshi Kikuchi. Accumulation of gene copy number variations during the early phase of free-spawning abalone speciation. Ecology and evolution. 2023. 13. 2. e9816
Akinori Teramura, Keita Koeda, Ayumi Matsuo, Mitsuhiko P. Sato, Hiroshi Senou, Hsuan-Ching Ho, Yoshihisa Suyama, Kiyoshi Kikuchi, Shotaro Hirase. Assessing the effectiveness of DNA barcoding for exploring hidden genetic diversity in deep-sea fishes. MARINE ECOLOGY PROGRESS SERIES. 2022. 701. 83-98
Ahammad Kabir, Risa Ieda, Sho Hosoya, Daigaku Fujikawa, Kazufumi Atsumi, Shota Tajima, Aoi Nozawa, Takashi Koyama, Shotaro Hirase, Osamu Nakamura, et al. Repeated translocation of a supergene underlying rapid sex chromosome turnover in Takifugu pufferfish. Proceedings of the National Academy of Sciences of the United States of America. 2022. 119. 23. e2121469119
Shotaro Hirase, Yusuke Kumai, Shuya Kato, Seishi Hagihara, Kiyoshi Kikuchi, Mari Kuroki. Genomic signatures for latitudinal selection in the tropical eel Anguilla marmorata. Journal of evolutionary biology. 2022. 35. 5. 763-771