Research keywords (5)：
database
, simulation
, structure
, protein
, 蛋白質 立体構造 データベース 分子シミュレーション
Research theme for competitive and other funds (5)：
2011 - 2014 Quantitative computational and informatics studies on protein-protein interaction systems based on their dynamic structures
2010 - 2011 Automatic determination and classification of structural domains of proteins and development of interaction database
2004 - 2006 Developing a new protein homology-modeling method with high precision
protein structure database
蛋白質立体構造データベース
Papers (73)：
Akira R. Kinjo, Gert-Jan Bekker, Hiroshi Wako, Shigeru Endo, Yuko Tsuchiya, Hiromu Sato, Hafumi Nishi, Kengo Kinoshita, Hirofumi Suzuki, Takeshi Kawabata, et al. New tools and functions in data-out activities at Protein Data Bank Japan (PDBj). Protein Science. 2017. 27. 1. 95-102
Gojobori T, Ikeo K, Katayama Y, Kawabata T, Kinjo AR, Kinoshita K, Kwon Y, Migita O, Mizutani H, Muraoka M, et al. VaProS: a database-integration approach for protein/genome information retrieval. Journal of structural and functional genomics. 2016. 17. 4. 69-81
Akira R. Kinjo, Gert-Jan Bekker, Hirofumi Suzuki, Yuko Tsuchiya, Takeshi Kawabata, Yasuyo Ikegawa, Haruki Nakamura. Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures. Nucleic Acids Research. 2016. 45. D1. D282-D288
Akira R. Kinjo, Gert-Jan Bekker, Hirofumi Suzuki, Yuko Tsuchiya, Takeshi Kawabata, Yasuyo Ikegawa, Haruki Nakamura. Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures. Nucleic Acids Research. 2016. 45. D1. D282-D288
Gert-Jan Bekker, Haruki Nakamura, Akira R. Kinjo. Molmil: a molecular viewer for the PDB and beyond. Journal of Cheminformatics. 2016. 8. 1
Ken Nishikawa, Akira R. Kinjo. Mechanism of evolution by genetic assimilation: Equivalence and independence of genetic mutation and epigenetic modulation in phenotypic expression. Biophysical Reviews. 2018. 10. 2. 667-676
Ken Nishikawa, Akira R. Kinjo. Essential role of long non-coding RNAs in de novo chromatin modifications: the genomic address code hypothesis. Biophysical Reviews. 2017. 9. 2. 73-77
Hirofumi Suzuki, Gert-Jan Bekker, Takahiro Kudo, Akira R. Kinjo, Kengo Kinoshita, Genji Kurisu, Haruki Nakamura. Play with 3D structure data of biomolecules - PDBj. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES. 2017. 73. C579-C579
Takeshi Kawabata, Haruki Nakamura, Akira Kinjo. Homcos : A Server to Search and Model 3D Structures of Protein-Protein and Compound-Protein Complexes. BIOPHYSICAL JOURNAL. 2014. 106. 2. 207A-207A
