Takatsuka Yumiko

タカツカユミコ | Takatsuka Yumiko

Affiliation and department：

Research field (3)： Applied microbiology , Applied biochemistry , Environmental load reduction/restoration technology

Research keywords (11)： Rhizoctonia solani , Double-Repeating Homologous Sequence Antifungal Polypeptide (DRHS-AFP) , reductive dehalogenase , biphenyl dioxygenase , polychlorinated biphenyls , ルーメン細菌 , リジン脱炭酸酵素 , ポリアミン , rumen bacteria , lysine decarboxylase , polyamine

Research theme for competitive and other funds (13)：

2022 - 2025 高塩素置換型ポリ塩化ビフェニル類の還元的脱塩素化を大気下で実現させる
2018 - 2021 Challenge to dechlorinate polychlorinated biphenyls under aerobic conditions with an engineered reductive dehalogenase
2015 - 2016 Creation of novel aromatic-ring hydroxylating dioxygenase with extended substrate specificity toward polychlorinated biphenyls
2014 - 2016 Biocontainment of genetically modified bacterium by programed bacterial cell death.
2011 - 2014 Molecular basis for the maintenance of envelope integrity in Selenomonas ruminantium: Controlled mechanism of cadaverine biosynthesis which covalently links to the peptidoglycan

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Papers (29)：

T.T. Nguyen, A.T.P. Bui, N.T.H. Le, H.T.N. Vo, A.H. Nguyen, T.D. Pham, T. Hara, K. Yokota, M. Matsutani, Y. Takatsuka, et al. Heat-stable spores of carotenoid-producing Bacillus marisflavi and non-pigmented Bacillus subtilis cooperatively promote growth, quality, and gut microbiota of white-leg shrimp. Beneficial Microbes. 2023. 14. 6. 623-640
Tomijiro Hara, Yumiko Takatsuka. Aerobic polychlorinated biphenyl-degrading bacteria isolated from the Tohoku region of Japan are not regionally endemic. Canadian journal of microbiology. 2022. 68. 3. 191-202
Tomijiro Hara, Yumiko Takatsuka, Yuh Shiwa, Kenji Yokota. Draft Genome Sequence of the Polychlorinated Biphenyl Degrader Comamonas testosteroni Strain YAZ2, Isolated from a Natural Landscape in the Tohoku Region of Japan. Microbiology resource announcements. 2022. 11. 1. e0080621
Tomijiro Hara, Yumiko Takatsuka, Eiji Nakata, Takashi Morii. Augmentation of an Engineered Bacterial Strain Potentially Improves the Cleanup of PCB Water Pollution. Microbiology spectrum. 2021. 9. 3. e0192621
Tomijiro Hara, Yumiko Takatsuka, Yuh Shiwa, Kenji Yokota, Tadasu Shin-i. Manual recursive mapping method for the draft genome sequence of Comamonas testosteroni strain YAZ2. figshare. 2021

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MISC (34)：

Development of the composite microbial catalysis for polychlorinated biphenyls degradation. 2014. 20. 315-320
Hara Tomijiro, Makuta Toshinori, Takatsuka Yumiko, Sano Katsunori, Niikuni Tokio. Ultrasonically generated microbubble with oxygen up-modulates the catalytic reaction of the biphenyl dioxygenase over-expressed bacterial formulation. Symposium on Environmental Engineering. 2013. 23. 114-117
Hara Tomijiro, Takatsuka Yumiko. 3P-119 Composite ratio of biphenyl dioxygenase-overexpressed bacterial formulations seems to influence on the catalytic activity of polychlorinated biphenyl degradation. 2013. 65. 218-218
原富次郎, 高塚由美子. 好気性細菌によるポリ塩化ビフェニル無害化研究と山形における実用化の将来展望. 産業と環境. 2012. 41. 10. 65-69
高塚由美子. 殺菌性抗生物質の作用機構-活性酸素を介した共通の「一本道」が明らかに-. 生物工学会誌. 2009. 87. 6. 291-291

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Patents (16)：

抗菌剤、農薬、および微生物による植物伝染病害の防除方法
コーヒーベリー病防除剤
新規ポリペプチド、新規ポリヌクレオチド及びそれらの用途
微生物触媒及びその使用
Antifungal agent, pesticide, method for controlling plant disease by means of microorganism, and novel Bacillus subtilis

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Books (2)：

Site-directed disulfide cross-linking to probe conformational change of a transporter during its functional cycle: Escherichia coli AcrB multidrug exporter as an example. In Vitro Mutagenesis Protocols, Third Edition (Methods in Molecular Biology, Vol. 634), J. Braman (Ed.)
Humana Press 2010
ポリアミンとルーメン微生物の膜構造. 新ルーメンの世界. (共著)
農文協 2004

Lectures and oral presentations (67)：

Rhizoctonia solani 菌糸融合群・亜群間におけるDRHS-AFP分泌性の違い
(日本農芸化学会2024年度大会 2024)
遺伝子組換え型DRHS-AFPの抗真菌活性の検討評価
(日本農芸化学会2024年度大会 2024)
Elucidation of the novel competitive function between microorganisms of genus Rhizoctonia by genomic approach
(The 14th International Symposium of Advanced Energy Science)
微生物分泌性物質によるコーヒーベリー病防除の可能性
(日本農芸化学会2023年度大会(広島))
子嚢菌門糸状菌に特異的に作用する新奇な 10 kDa 抗真菌蛋白質の単離
(日本農芸化学会2023年度大会(広島))

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Education (3)：

1997 - 2000 Tohoku University Graduate School of Agricultural Science
1995 - 1997 Tohoku University Graduate School of Agricultural Science
1991 - 1995 Tohoku University Faculty of Agriculture

Professional career (2)：

Doctor (Agriculture) (Tohoku University)
Mastor (Agriculture) (Tohoku University)

Work history (6)：

2018/04 - 現在 Kyoto University Institute of Advanced Energy
2017 - 2017 Kyoto Prefectural University of Medicine
2009/10 - 2016/03 Yamagata University Graduate School of Science and Engineering
2003/05 - 2009/12 University of California, Berkeley Molecular and Cell Biology
2001/04 - 2004/03 東北大学大学院農学研究科日本学術振興会特別研究員(PD)

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Association Membership(s) (4)：

日本菌学会 , The Society for Biotechnology, Japan , American Society for Microbiology , The Japan Society for Bioscience, Biotechnology, and Agrochemistry (JSBBA)

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