Rchr
J-GLOBAL ID:200901020750099695   Update date: Apr. 05, 2024

AOKI-KINOSHITA Kiyoko

キノシタ キヨコ | AOKI-KINOSHITA Kiyoko
Affiliation and department:
Job title: Professor
Homepage URL  (2): https://www.soka.ac.jp/faculty-profiles/kiyoko-kinoshita/https://www.soka.ac.jp/en/faculty-profiles/kiyoko-kinoshita/
Research field  (5): Applied biochemistry ,  Molecular biochemistry ,  Biological, health, and medical informatics ,  Information networks ,  Computer systems
Research keywords  (16): ウェブ開発 ,  ソフトウェア開発 ,  分散ネットワーク ,  アルゴリズム ,  データマイニング ,  機械学習 ,  糖鎖インフォマティクス ,  バイオインフォマティクス ,  web programming ,  software development ,  distributed networks ,  algorithms ,  data mining ,  machine learning ,  glycome informatics ,  Bioinformatics
Research theme for competitive and other funds  (12):
  • 2023 - 2026 Construction of Glycobiomarker Deevelopment Technology Driven by Glycoinformatics
  • 2022 - 2026 Development of a new system employing the automatic evaluation function of L2 shadowing to enhance communicative English skills
  • 2022 - 2025 Analysis of archetype glycan structures in the glycan structure repository and its practical application
  • 2018 - 2021 Glycan profiling of oral precancerous lesions using Mass Spectrometry Imaging
  • 2016 - 2020 Development of a language-independent system for automatic evaluation of L2 oral reproduction tasks and the study of its application in foreign language education
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Papers (131):
  • Elizabeth N Wallace, Connor A West, Colin T McDowell, Xiaowei Lu, Evelyn Bruner, Anand S Mehta, Kiyoko F Aoki-Kinoshita, Peggi M Angel, Richard R Drake. An N-glycome tissue atlas of 15 human normal and cancer tissue types determined by MALDI-imaging mass spectrometry. Scientific reports. 2024. 14. 1. 489-489
  • Yushi Takahashi, Masaaki Shiota, Akihiro Fujita, Issaku Yamada, Kiyoko F Aoki-Kinoshita. GlyComb: a novel glycoconjugate data repository that bridges glycomics and proteomics. The Journal of biological chemistry. 2024. 105624-105624
  • Eriko Aoki, Noriyoshi Manabe, Shiho Ohno, Taiga Aoki, Jun-Ichi Furukawa, Akira Togayachi, Kiyoko Aoki-Kinoshita, Jin-Ichi Inokuchi, Kenji Kurosawa, Tadashi Kaname, et al. Predicting the pathogenicity of missense variants based on protein instability to support diagnosis of patients with novel variants of ARSL. Molecular Genetics and Metabolism Reports. 2023. 37. 101016-101016
  • Koichi Arakawa, Tamiko Ono, Kiyoko F Aoki-Kinoshita, Yasunori Yamamoto. Development of an integrated and inferenceable RDF database of glycan, pathogen and disease resources. Scientific data. 2023. 10. 1. 582-582
  • Tiejun Cheng, Tamiko Ono, Masaaki Shiota, Issaku Yamada, Kiyoko F Aoki-Kinoshita, Evan E Bolton. Bridging glycoinformatics and cheminformatics: integration efforts between GlyCosmos and PubChem. Glycobiology. 2023. 33. 6. 454-463
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MISC (104):
  • 青木英莉子, 真鍋法義, 大野詩歩, 青木大芽, 古川潤一, 栂谷内晶, 木下聖子, 井ノ口仁一, 黒澤健司, 要匡, et al. A new method for diagnosis and predicting X-linked recessive brachytelephalangic chondrodysplasia punctata: Computational analysis and identification of novel missense mutation. 日本分子生物学会年会プログラム・要旨集(Web). 2022. 45th
  • 要匡, 太田隼人, 柳久美子, 花松久寿, PECORI Federico, 古川潤一, 山口芳樹, 上原朋子, 井ノ口仁一, 木下聖子, et al. Genes to diagnosis and therapy in glycogenomics disorders: The example of GDP-fucose transporter deficiency, a rare disease. 日本分子生物学会年会プログラム・要旨集(Web). 2022. 45th
  • 西原祥子, 木下聖子, 栂谷内晶, 細田正恵, 伊藤和義, 山口芳樹, 真鍋法義, 大野詩歩, 稲森啓一郎, 井ノ口仁一, et al. Comprehensive extraction and analysis of the whole human glycan-related gene variant. 日本糖質学会年会要旨集. 2021. 40th
  • 山田一作, 塩田正明, 高橋悠志, 新町大輔, 小野多美子, 土屋伸一郎, 松原正陽, 木村直貴, 瀬野瑛, 細田正恵, et al. Glycoscience portal GlyCosmos 2021. 日本糖質学会年会要旨集. 2021. 40th
  • 木下聖子, 塩田正明, 高橋悠志, 新町大輔, 小野多美子, 土屋伸一郎, 松原正陽, 木村直貴, 瀬野瑛, 細田正恵, et al. Glycan-related omics data integrated in the GlyCosmos Glycoscience Portal. 日本分子生物学会年会プログラム・要旨集(Web). 2021. 44th
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Books (5):
  • Glycoscience : basic science to applications : insights from the Japan consortium for glycobiology and glycotechnology (JCGG)
    Springer 2019 ISBN:9789811358555
  • A Practical Guide to Using Glycomics Databases
    Springer Japan 2017
  • Bioinformatics for Systems Biology
    Humana Press 2013 ISBN:9781934115022
  • Glycome Informatics - Methods and Applications
    CRC Press 2013 ISBN:9781420083347
  • Bioinformatics for Glycobiology and Glycomics: an Introduction
    Wiley 2013 ISBN:9780470016671
Lectures and oral presentations  (10):
  • Introduction to GlyCosmos
    (SIB Training Course 2021)
  • ニューラルネットワークによる糖タンパク質からの遺伝子変異量予測
    (情報処理学会第83回全国大会 2021)
  • 糖鎖情報を組み込んだニューラルネットワークによる薬剤とタンパク質の相互作用予測
    (情報処理学会第83回全国大会 2021)
  • 糖鎖関連データベース(GlyCosmosなど)
    (AJACSオンライン4「配列以外の分子情報を検索する」 2020)
  • 糖鎖とプロテオミクスの融合を目指すGlyCosmos Portal
    (第43回日本分子生物学会年会 2020)
more...
Education (6):
  • - 1999 ノースウェスタン大学 工学研究科 コンピュータ工学
  • - 1999 Northwestern University Graduate School, Division of Engineering Computer Engineering
  • - 1996 ノースウェスタン大学 工学部 電子工学・コンピュータ科学
  • - 1996 ノースウェスタン大学 工学研究科 コンピュータ科学
  • - 1996 Northwestern University Faculty of Engineering Electrical Engineering and Computer Science
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Professional career (1):
  • Ph.D. (Northwestern University)
Work history (9):
  • 2024/02 - 現在 Nagoya University iGCORE Professor
  • 2021/01 - 現在 Soka University Glycan and Life Systems Integration Center (GaLSIC) Deputy Director
  • 2014/04 - 現在 Soka University Professor
  • 2008/04 - 2014/03 Soka University Associate Professor
  • 2006/04 - 2008/03 Soka University Lecturer
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Committee career (7):
  • 2020/01 - 現在 JSBi Board of directors
  • 2019/09 - 現在 JSCR Board of Directors
  • 2015/04 - 現在 JCGG Councilor
  • 2011/04 - 現在 JSCR Board Member
  • 2014 - 2019 FCCA Board of Directors
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