2017 - 2020 Highly massive parallel evolutionary computation for designing artificial genetic circuits and microbe networks
2015 - 2018 Multicellular analog/digital computing with cellular neighbouhood communication validated by Synthetic Biology
2014 - 2018 Implementation of massive parallel Evolutionaly Computation from Biological experiment data analysis obtained by wetGA
2013 - 2016 Organella Computing
2011 - 2016 Design and Analysis for Dynamical Genetic Circuits based on various Mathematical Models
2011 - 2016 Synthetic Biology for the Comprehension of Biomolecular Networks
2011 - 2014 Massive Parallel Evolutionary Computation Theory based on a Molecular Realization of WetGA
2011 - 2012 Sugar Chain Computer-Analyzing Computational Power of the 3rdBiological Chain Material
2002 - 2007 分子プログラミング
2006 - 2006 計算機科学における離散と連続に関する調査と新しい展開
2005 - 2006 Large Scaled Fast Aqueous Computing with Light Responsive DNA upon Micro Fluidic Devices
2002 - 2006 ナチュラルコンピューティングの分子実現とその設計論
2002 - 2004 A realization of Aqueous Computing by using Droplet Microfluidic Devices and Molecular Reinforcement Learning.
2000 - 2001 A Biomolecular Implementation and Applications of Large Scale Molecular Memories Based on Aqueous Computing
1998 - 1999 A Study on Reinforcement Learning with Knowledge
1995 - 1997 進化的探索の理論
1994 - 1994 不確実かつ報酬に遅れのある環境下での強化学習
1993 - 1994 Machine Discovery and Machine Learning Based on Adaptation and Evolution
1991 - 1993 統合的学習による不完全領域理論の逐次的洗練化
1992 - 1992 統合的学習による不完全領域理論の遂次的洗練化
1991 - 1991 統合的学習による不完全領域理論の逐次的洗練化
1990 - 1991 Integration of Deductive Learning and Inductive Learning by Extended EBL
1990 - 1990 自律分散システムにおける問題解決と学習に関する人工知能的接近
A Theoretic Analysis on Evolutionary Computation
DNA computing with plasmid
進化型計算の理論
プラスミドによるDNA計算
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Papers (45)：
Shuuki Takizawa, Akifumi Nishida, Masayuki Yamamura. Alternative state transition control by regulating the spatial arrangement of organisms using a lattice model. Ecosphere. 2022. 13. 3
Akifumi Nishida, Mayuko Nakagawa, Masayuki Yamamura. Determinism of microbial community assembly by drastic environmental change. PLOS ONE. 2021. 16. 12. e0260591-e0260591
Pramudwiatmoko Arif, Gutmann Gregory, Ueno Yutaka, Kakugo Akira, Yamamura Masayuki, Konagaya Akihiko. Tensegrity representation of microtubule objects using unified particle objects and springs. Chem-Bio Informatics Journal. 2020. 20. 0. 19-43
Roopa Dharmatti, Hideyuki Miyatake, Avanashiappan Nandakumar, Motoki Ueda, Kenya Kobayashi, Daisuke Kiga, Masayuki Yamamura, Yoshihiro Ito. Enhancement of Binding Affinity of Folate to Its Receptor by Peptide Conjugation. International journal of molecular sciences. 2019. 20. 9
Takefumi Moriya, Tomohiro Yamaoka, Yuki Wakayama, Shotaro Ayukawa, Zicong Zhang, Masayuki Yamamura, Shinji Wakao, Daisuke Kiga. Comparison between Effects of Retroactivity and Resource Competition upon Change in Downstream Reporter Genes of Synthetic Genetic Circuits. Life (Basel, Switzerland). 2019. 9. 1
Multitask Reinforcement Learning with Value Statistics
2003
GA-based Generic Method for Protein Structure Comparison
2003 Congress on Evolutionary Computation (CEC 2003) 2003
Exploiting Value Statistics for Similar Continuing Tasks
12th IEEE Workshop Robot and Human Interactive Communication (RO-MAN 2003) 2003
Two-layer Protein Structure Comparison
15th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2003) 2003
Asynchronous Real-coded Genetic Algorithms for Simultaneous Protein Structure-based Alignment
Proc. GECCO2003: Proceedings of the Bird of a Feather Workshops 2003
Experimental Validation of Signal Dependent Operation in Whiplash PCR
(Fourteenth International Meeting on DNA Based Computers (DNA14) 2009)
Experimental Validation of Signal Dependent Operation in Whiplash PCR
(Fourteenth International Meeting on DNA Based Computers (DNA14) 2009)
自律DNA分子計算 - in vitro インテリジェンスの構築
(システム・情報部門 学術講演会 2009 (SSI2009) 2009)
A realization of DNA molecular machine that walks autonomously by using a restriction enzyme
(Thirteenth International Meeting on DNA Based Computers (DNA13) 2008)
An Interface for a Computing Model Using Methylation to Allow Precise Population Control by Quantitative Monitoring
(Thirteenth International Meeting on DNA Based Computers (DNA13) 2008)
1996 - IIZUKA'96優秀論文(Best Paper Award at IIZUKA96)
1995 - 人工知能学会1995年度全国大会優秀論文
1994 - 人工知能学会1994年度論文賞
1994 - 人工知能学会1994年度全国大会優秀論文
Association Membership(s) (9)：
American Association for Artificial Intelligence
, International Society for Computational Biology
, 計測自動制御学会
, International Society for Computational Biology
, ソフトウエア科学会
, American Association for Artificial Intelligence
, 進化経済学会
, 人工知能学会
, 認知科学会
