Hori Tomoyuki

ホリトモユキ | Hori Tomoyuki

Affiliation and department：
Homepage URL (1)： https://unit.aist.go.jp/env-mri/121env-eco/ja/index.html

Research field (5)： Environmental load reduction/restoration technology , Applied microbiology , Ecology and environmental science , Space and planetary science , Environmental dynamics

Research keywords (4)： Environmental Biotechnology , Ecophysiology , MIcrobiology , Microbial Ecology

Research theme for competitive and other funds (27)：

2024 - 2027 貧酸素海域における炭素循環:化学合成独立栄養微生物の一次生産機能の実態と影響解明
2023 - 2026 メタン生成と共役するリグニン分解:深部ガス田から探る新たな微生物機能
2023 - 2026 動的な微生物活性の評価技術開発:安定同位体基質のRNAへの取り込み定量化
2023 - 2026 Harnessing active N2O-reducing polyphosphate-accumulating bacteria for developing innovative biotechnology toward low greenhouse gas emissions and phosphorus recovery
2022 - 2026 Elucidation of the soil decomposition process by the dynamic multiomics approach

2022 - 2025 環境微生物学と大気化学の融合が拓く森林生態系炭素動態の統合的理解と将来予測

2020 - 2023 Exploring new functions of N2O-reducing bacteria by a novel culturing method and stable isotope probing: N2O mitigation and production of valuables

2019 - 2022 Production of fish oil-alternatives from food waste toward to realizing robust aquaculture

2019 - 2022 地下圏炭素・エネルギー動態のミッシングリンク:結晶性酸化鉄が主導する微生物新機能

2018 - 2021 Studies for better understandings of dynamics of greenhouse gases in forest ecosystems through the fusion of atmospheric chemistry and advanced genetic analysis

2017 - 2020 Elucidation of N2O production/consumption mechanisms in biofilms and development of a wastewater treatment technology mitigating N2O emission

2016 - 2020 Ecophysiology of rare biosphere revealed by a combination of stable isotope probing and high-throughput sequencing

2016 - 2019 Development of a hybrid soil remediation system using arsenic-mobilizing bacteria and an arsenic hyperaccumulator plant

2016 - 2019 Novel microbial metabolism responsible for the carbon flux in deep subseafloor sediments as revealed by isolation and stable isotope probing

2016 - 2018 Exploration and isolation of nosZ clade II type N2O-reducing bacteria by a novel enrichment device

2014 - 2018 Elucidating mechanisms of activated sludge reduction by a high-pressure jet device

2014 - 2017 Elucidating N2O production mechanisms by ammonia-oxidizing bacteria based on nitrogen atoms and electron flows

2014 - 2016 Ultra-high sensitive identification of unknown lipid-degrading microorganism in activated sludge to develop of microbiological control for membrane bioreactor

2014 - 2016 Enrichment and isolation of nitrous oxide reducing bacteria by a gas-permeable membrane device

2013 - 2016 Symbiotic bacteria-mediated insecticide resistance: ecology of fenitrothion degrading bacteria in agricultural field

2013 - 2016 Identification and characterization of microorganisms involved in the carbon and energy cycles in the deep biosphere

2012 - 2014 Development in on-site remediation of the heavy metal-contaminated soils by the metabolic activation of as-yet-unidentified microorganisms

2009 - 2011 陸上地下圏メタン動態に関与する新規な嫌気呼吸未培養細菌の探索と分離培養

2008 - 2008 地下圏メタンフラックスに関与する新規な嫌気呼吸未培養細菌の探索と分離培養

陸上地下圏の金属元素動態に関わる未知微生物群の同定

増えずに生き続ける代謝戦略- 地球炭素循環の鍵をにぎる微生物新機能-

未知微生物群の機能を活用したオンサイト環境修復技術の開発

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Papers (128)：

Ralph Rolly Gonzales, Keizo Nakagawa, Susumu Hasegawa, Kazuo Kumagai, Atsushi Matsuoka, Yasunao Okamoto, Zhan Li, Zhaohuan Mai, Tomohisa Yoshioka, Tomoyuki Hori, et al. Treatment of high-strength wastewater with coupled flocculation and membrane filtration prior to ammoniacal nitrogen enrichment by osmotically assisted reverse osmosis. Separation and Purification Technology. 2025. 352. 128159-128159
Keisuke Kawano, Kai Kawabe, Yuki Sano, Tomoyuki Hori, Minoru Kihara, Yoshitomo Kikuchi, Hideomi Itoh. Wild gut microbiome suppresses the opportunistic pathogen Aeromonas in medaka under domesticated rearing conditions. 2024
Yuya Sato, Takaya Hamai, Yusei Masaki, Tomo Aoyagi, Tomohiro Inaba, Tomoyuki Hori, Hiroshi Habe. Replacing rice bran with low-molecular-weight substrates affected the performance and metabolic feature of sulfate-reducing bioreactors treating acid mine drainage. Journal of Environmental Chemical Engineering. 2024. 12. 2
Jingyu Duan, Kohei Oba, Tomoyuki Hori, Taku Fujiwara, Susanne Lackner, Akihiko Terada. Modeling of an aerobic granular sludge process for ammonia retention: Insights into granule size, dissolved oxygen concentration, and solids retention time. Journal of Environmental Chemical Engineering. 2024. 12. 2
Yusuke Miyajima, Tomo Aoyagi, Hideyoshi Yoshioka, Tomoyuki Hori, Hiroshi A. Takahashi, Minako Tanaka, Ayumi Tsukasaki, Shusaku Goto, Masahiro Suzumura. Impact of Concurrent aerobic-anaerobic Methanotrophy on Methane Emission from Marine Sediments in Gas Hydrate Area. Environmental Science & Technology. 2024. 58. 11. 4979-4988

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MISC (127)：

青柳智, 堀知行. Metabolic characteristics of organic acid-degrading bacteria inferred by response analysis of an anaerobic digestion reactor. 日本水環境学会年会講演集. 2023. 57th
西島美由紀, 太田雄貴, 堀知行, 青柳智, 井口亮, 鈴木淳, 鈴村昌弘. 日本海深海域における堆積物内の生物多様性評価-メタバーコーディング解析によるアプローチ-. マリンバイオテクノロジー学会大会講演要旨集. 2023. 23rd
森郁晃, 青柳智, 堀知行, 諸野祐樹, 和田実. Effects of re-oxygenation of coastal hypoxia on the sediment chemolithoautotrophic microbial community and activity. 日本微生物生態学会大会(Web). 2023. 36th
青柳智, 寺田昭彦, 堀知行. Development of biological treatment process to convert nitrogen components in industrial wastewater into NH₄⁺. 日本微生物生態学会大会(Web). 2023. 36th
花島大, 前田武己, 青柳智, 堀知行. Changes in bacterial and fungal communities during cow manure composting under low-temperature environment. 日本微生物生態学会大会(Web). 2023. 36th

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Books (3)：

日本微生物生態学会誌(総説結晶性酸化鉄を還元する土壌微生物 : その生態学的意義と利用技術)
日本微生物生態学会 2010
難培養微生物研究の最新技術II (第3章 Stable Isotope Probing法とその応用)
シーエムシー出版 2010
生物工学会誌 (バイオミディア環境微生物研究法の現在)
日本生物工学会 2008

Professional career (1)：

博士(農学) (東京大学)

Work history (7)：

2023/04 - 現在産業技術総合研究所上級主任研究員
2013/03 - 2023/03 産業技術総合研究所主任研究員
2011/04 - 2013/02 産業技術総合研究所研究員
2009/04 - 2011/03 日本学術振興会学振特別研究員(PD)
2008/04 - 2009/03 産業技術総合研究所産総研特別研究員

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Committee career (5)：

2017 - 現在公益社団法人日本水環境学会微生物生態と水環境工学研究委員会幹事
2017 - 2018 日本微生物生態学会庶務幹事
2014 - 2015 公益社団法人日本生物工学会代議員
2012 - 2015 一般財団法人バイオインダストリー協会トピックス委員
2008 - 2010 日本微生物生態学会若手会世話人

Awards (2)：

2023 - 日本微生物生態学会奨励賞
2018 - 環境バイオテクノロジー学会奨励賞

Association Membership(s) (5)：

環境バイオテクノロジー学会 , JAPAN SOCIETY ON WATER ENVIRONMENT , 日本生物工学会 , 日本農芸化学会 , 日本微生物生態学会

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