2011 - 2015 Analyses of behavior incompatibility triggered by expression changes of pigmentation genes
2011 - 2014 Experimental estimation of evolutionary adaptation to cooler climate by Drosophila albomicans during distribution expansion to the temperate zones
2008 - 2010 Association between ebony gene polymorphism and mate preference in Drosophila
Bernard Y. Kim, Hannah R. Gellert, Samuel H. Church, Anton Suvorov, Sean S. Anderson, Olga Barmina, Sofia G. Beskid, Aaron A. Comeault, K. Nicole Crown, Sarah E. Diamond, et al. Single-fly assemblies fill major phylogenomic gaps across the Drosophilidae Tree of Life. PLoS Biol. 2024. 22. 7. e3002697
Airi Sato, Joanne Y Yew, Aya Takahashi. Effect of acetic acid bacteria colonization on oviposition and feeding site choice in Drosophila suzukii and its related species. microPublication Biology. 2024. 10.17912/micropub.biology.001111
Yuichi Fukutomi, Aya Takahashi, Shigeyuki Koshikawa. Thermal plasticity of wing size and wing spot size in Drosophila guttifera. Development Genes and Evolution. 2023. https://doi.org/10.1007/s00427-023-00705-x
Kentaro M. Tanaka, Kanoko Takahashi, Gavin Rice, Mark Rebeiz, Yoshitaka Kamimura, Aya Takahashi. Trichomes on female reproductive tract: rapid diversification and underlying gene regulatory network in Drosophila suzukii and its related species. BMC Ecology and Evolution. 2022. 22. 1
Eden McQueen, Mehrnaz Afkhami, Joel Atallah, Nicolas Gompel, Yael Heifetz, Yoshitaka Kamimura, John P. Masly, Patrick O’Grady, Julianne Peláez, Mark Rebeiz, et al. A Standardized Nomenclature and Atlas of the Female Terminalia of Drosophila melanogaster. Fly. 2022. 16. 128-151
Naoki Osada, Ryutaro Miyagi, Aya Takahashi. Genome-wide analysis of cis- and trans-regulatory effects on gene expression using allele samples from a natural population of Drosophila melanogaster. GENES & GENETIC SYSTEMS. 2016. 91. 6. 372-372
Natsuki Moriguchi, Kentaro Uchiyama, Ryutaro Miyagi, Aya Takahashi, Koichiro Tamura, Yoshihiko Tsumura, Kosuke M. Teshima, Junko Kusumi, Tachida Hidenori. Analysis of population structure of Cryptomeria japonica based on amplicon sequenced data. GENES & GENETIC SYSTEMS. 2016. 91. 6. 369-369
Yasuaki Takada, Aya Takahashi, Ryutaro Miyagi, Toshinori Endo, Naoki Osada. The cause of gene expression changes in reciprocal crosses of Drosophila melanogaster by measuring allele-specific gene expression. GENES & GENETIC SYSTEMS. 2016. 91. 6. 372-372
Noriyoshi Akiyama, Ryutaro Miyagi, Aya Takahashi. Adaptive significance and molecular mechanisms of intra-specific body color variation in D. melanogaster. GENES & GENETIC SYSTEMS. 2015. 90. 6. 402-402