Rchr
J-GLOBAL ID:200901084345719960
Update date: May. 02, 2024
Endo Toshinori
エンドウ トシノリ | Endo Toshinori
Affiliation and department:
Job title:
Professor
Research field (6):
Evolutionary biology
, Biodiversity and systematics
, Functional biochemistry
, Genomics
, Molecular biochemistry
, Biological, health, and medical informatics
Research keywords (5):
遺伝子進化と生物進化
, positive natural selection
, prediction of function by means of machine learning
, gene structure and function
, Information Biology
Research theme for competitive and other funds (11):
- 2018 - 2023 Inference of human migration to Yaponesia based on animal and plant genome sequence analyses.
- 2019 - 2022 On molecular mechanism to produce phenotypically adaptive variation among genetic clones of ants
- 2014 - 2018 Building Comparative Genome Database for Invertebrate Species
- 2014 - 2016 Establishment of virtual assay system by molecular dynamic simulation of HCV antiviral resistance
- 2012 - 2014 インターメア機能配列の情報量規準と機械学習による同定および進化的解析
- 2005 - 2009 An informatics approach to the systematic understanding of a model disease
- 2008 - GPGPUによる高速マルチプルアラインメント法の開発
- 2008 - Development of GPGPU based multiple sequence alignment method
- 2005 - オーファンエンザイム情報に基づく遺伝子機能予測
- 2005 - Prediction of the function of hypothetical genes based on the information of orphan enzymes
- 2002 - 2004 ゲノムの遺伝子プロファイルによる生物の形態形成機構の解明
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Papers (47):
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Kazumichi Fujiwara, Shunpei Kubo, Toshinori Endo, Toyoyuki Takada, Toshihiko Shiroishi, Hitoshi Suzuki, Naoki Osada. Inference of selective forces on house mouse genomes during secondary contact in East Asia. Genome Research. 2024
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Sangeetha Ratnayake, Axel Martinelli, Toshinori Endo, Naoki Osada. Advancing Antibody-antigen Interface Analysis in Docking Scoring Functions for Precision Docking Analysis. IPSJ Transactions on Bioinformatics. 2024. 17. 40-47
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Sangeetha Ratnayake, Axel Martinelli, Toshinori Endo, Naoki Osada. Exploring The Interplay Between Scoring Functions and Physico-chemical Properties in Antibody-antigen Docking. IPSJ Transactions on Bioinformatics. 2024. 17. 10-17
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So Nakagawa, Shoichi Sakaguchi, Atsushi Ogura, Katsuhiko Mineta, Toshinori Endo, Yoshiyuki Suzuki, Takashi Gojobori. Current trends in RNA virus detection through metatranscriptome sequencing data. FEBS open bio. 2023. 13. 6. 992-1000
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Yi Cong, Toshinori Endo. Multi-Omics and Artificial Intelligence-Guided Drug Repositioning: Prospects, Challenges, and Lessons Learned from COVID-19. OMICS: A Journal of Integrative Biology. 2022. 26. 7. 361-371
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MISC (27):
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Sangeetha Udani Ratnayake, Toshinori Endo, Naoki Osada. Revisiting the Relationship between Evolutionary Conservation and Disease Causality: A Case Study of Beta Globin Gene. GENES & GENETIC SYSTEMS. 2016. 91. 6. 345-345
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Yasuaki Takada, Aya Takahashi, Ryutaro Miyagi, Toshinori Endo, Naoki Osada. The cause of gene expression changes in reciprocal crosses of Drosophila melanogaster by measuring allele-specific gene expression. GENES & GENETIC SYSTEMS. 2016. 91. 6. 372-372
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安富祖仁, 峯田克彦, 遠藤俊徳. グラフを用いたタンパク質のモーション表現法の提案. 研究報告バイオ情報学(BIO). 2013. 2013. 7. 1-7
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安富祖仁, 峯田克彦, 遠藤俊徳. グラフを用いたタンパク質のモーション表現法の提案. 研究報告数理モデル化と問題解決(MPS). 2013. 2013. 7. 1-7
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Liu Zheng, Katsuhiko Mineta, Toshinori Endo. Development of an efficient multiple sequence alignment method using GPGPU. GENES & GENETIC SYSTEMS. 2013. 88. 6. 380-380
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Books (18):
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生物の科学 遺伝 Vol.76 No.4 特集:メンデル生誕200年記念
エヌ・ティー・エス 2022 ISBN:486043756X
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Encyclopedia of genetics : origin of inheritance and diversity
2022 ISBN:9784621306604
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改訂 遺伝単 -遺伝学用語集 対訳付き (『生物の科学 遺伝』別冊No.25)
エヌ・ティー・エス 2021 ISBN:4860437128
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遺伝単-遺伝学用語集 対訳付き (生物の科学 遺伝 別冊No.22)
エヌ・ティー・エス 2017 ISBN:4860434994
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分子生物学のためのバイオインフォマティクス入門 : 生物情報解析の理論とアルゴリズム
共立出版 2001 ISBN:4320055802
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Lectures and oral presentations (1):
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Evolutionary analysis of Mollicutes based on standardized phylogenetic tree
(2013)
Education (3):
- 1993 - 1996 The Graduate University for Advanced Studies School of Life Science Department of Genetics
- 1990 - 1993 University of Tokyo School of Science Department of Biophysics and Biochemistry
- 1986 - 1990 Tokyo University Faculty of Science Department of Biophysics and Biochemistry
Professional career (2):
- Ph.D. in Genetics (The Graduate University for Advanced Studies)
- Master.of Science (The University of Tokyo)
Work history (13):
- 2019/04 - 現在 Hokkaido University Faculty of Information Science and Technology Professor
- 2016/12 - 現在 Hokkaido University
- 2020/04 - 2021/03 Hokkaido University
- 2020/04 - 2021/03 Hokkaido University
- 2004/04 - 2019/03 Hokkaido University Graduate School of Information Science and Technology Professor
- 2015/04 - 2017/03 Hokkaido University
- 2014/04 - 2015/03 Hokkaido University Graduate School of Information Science and Technology
- 2014/04 - 2015/03 Hokkaido University Department of Informatics and Electronics, Faculty of Engineering Department Chair
- 2008/04 - 2009/03 Hokkaido University Graduate School of Information Science and Technology
- 2000/04 - 2004/03 Tokyo Medical and Dental University Lecturer
- 1999/05 - 2000/03 RIKEN Genome Sciences Center Researcher
- 1997/04 - 1999/04 Japan Society for the Promotion of Science
- 1996/04 - 1997/03 New Energy and Industrial Technology Development Organization Researcher
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Committee career (15):
- 2019/04 - 現在 Japanese Society for Bioinformatics Chair of Hokkaido Region
- 2016/12 - 現在 数理・データサイエンス教育強化拠点コンソーシアム 委員
- 2011/04 - 現在 日本情報処理学会 バイオ情報学研究会論文誌編集委員会
- 2011/04 - 現在 日本情報処理学会 バイオ情報学研究会運営委員会
- 2009 - 現在 日本遺伝学会 幹事
- 2020/09 - 2022/10 Genetics Society of Japan Congress Chair of the 94th Annual Meeting
- 2018/04 - 2022/03 札幌市IoTイノベーション推進コンソーシアム BI研究部会委員
- 2003 - 2021/06 生き物文化誌学会 常任理事
- 2016/09 - 2019/03 Japanese Society for Bioinformatics Council
- 2016/10 - 2017/12 Informatics In Biology, Medicine and Pharmacology (IIBMP) / Annual Meetings of Japan Society of Bioinformatics Chair
- 2011 - Society for Molecular Biology and Evolution 年会準備委員
- 2011 - Society for Molecular Biology and Evolution Annual meeting committee member
- 2008 - 2010 日本遺伝学会 第82回大会実行委員
- 2005 - 2007 日本バイオインフォマティクス学会 幹事
- 2005 - 2007 日本バイオインフォマティクス学会 北海道地域部会長
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Association Membership(s) (7):
Japan Society of Bioinformatics
, 生き物文化誌学会
, Genetics Society of Japan
, 日本進化学会
, 日本情報処理学会
, Society for Molecular Biology and Evolution
, 日本情報処理学会バイオ情報学研究会
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