Endo Toshinori

エンドウトシノリ | Endo Toshinori

Affiliation and department：
Job title： Professor

Research field (6)： Evolutionary biology , Biodiversity and systematics , Functional biochemistry , Genomics , Molecular biochemistry , Biological, health, and medical informatics

Research keywords (5)：遺伝子進化と生物進化 , positive natural selection , prediction of function by means of machine learning , gene structure and function , Information Biology

Research theme for competitive and other funds (11)：

2018 - 2023 Inference of human migration to Yaponesia based on animal and plant genome sequence analyses.
2019 - 2022 On molecular mechanism to produce phenotypically adaptive variation among genetic clones of ants
2014 - 2018 Building Comparative Genome Database for Invertebrate Species
2014 - 2016 Establishment of virtual assay system by molecular dynamic simulation of HCV antiviral resistance
2012 - 2014 インターメア機能配列の情報量規準と機械学習による同定および進化的解析

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Papers (48)：

Yi Cong, Toshinori Endo. A Quadruple Revolution: Deciphering Biological Complexity with Artificial Intelligence, Multiomics, Precision Medicine, and Planetary Health. OMICS: A Journal of Integrative Biology. 2024
Kazumichi Fujiwara, Shunpei Kubo, Toshinori Endo, Toyoyuki Takada, Toshihiko Shiroishi, Hitoshi Suzuki, Naoki Osada. Inference of selective forces on house mouse genomes during secondary contact in East Asia. Genome Research. 2024
Sangeetha Ratnayake, Axel Martinelli, Toshinori Endo, Naoki Osada. Advancing Antibody-antigen Interface Analysis in Docking Scoring Functions for Precision Docking Analysis. IPSJ Transactions on Bioinformatics. 2024. 17. 40-47
Sangeetha Ratnayake, Axel Martinelli, Toshinori Endo, Naoki Osada. Exploring The Interplay Between Scoring Functions and Physico-chemical Properties in Antibody-antigen Docking. IPSJ Transactions on Bioinformatics. 2024. 17. 10-17
So Nakagawa, Shoichi Sakaguchi, Atsushi Ogura, Katsuhiko Mineta, Toshinori Endo, Yoshiyuki Suzuki, Takashi Gojobori. Current trends in RNA virus detection through metatranscriptome sequencing data. FEBS open bio. 2023. 13. 6. 992-1000

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MISC (135)：

藤原一道, 久保俊平, 遠藤俊徳, 高田豊行, 城石俊彦, 鈴木仁, 長田直樹. Decoding the evolutionary dynamics: exploring hybridization of house mouse subspecies in East Asia. 日本進化学会大会プログラム・講演要旨集(Web). 2023. 25th
細川竜聡, 里村和浩, 長田直樹, 遠藤俊徳. De novo Gene Birth:ゲノムの非コード領域から新たに誕生する遺伝子. 日本遺伝学会大会プログラム・予稿集. 2023. 95th (CD-ROM)
CONG Yi, 長田直樹, 遠藤俊徳. Study on Drug Repurposing Prediction Using Disease-Specific Gene Expression Data. 日本分子生物学会年会プログラム・要旨集(Web). 2023. 46th
遠藤俊徳. メンデル生誕200年記念 6 日本における遺伝学の発展. 生物の科学遺伝. 2022. 76. 4. 286-289
柴山竜三郎, 遠藤俊徳, 長田直樹, 谷口浩二. シングルセルRNA-seqデータを用いた老化細胞除去後の非CpG island遺伝子群の発現変動解析. 日本遺伝学会大会プログラム・予稿集. 2022. 94th (CD-ROM)

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Books (18)：

生物の科学遺伝 Vol.76 No.4 特集:メンデル生誕200年記念
エヌ・ティー・エス 2022 ISBN:486043756X
Encyclopedia of genetics : origin of inheritance and diversity
2022 ISBN:9784621306604
改訂遺伝単 -遺伝学用語集対訳付き (『生物の科学遺伝』別冊No.25)
エヌ・ティー・エス 2021 ISBN:4860437128
遺伝単-遺伝学用語集対訳付き (生物の科学遺伝別冊No.22)
エヌ・ティー・エス 2017 ISBN:4860434994
分子生物学のためのバイオインフォマティクス入門 : 生物情報解析の理論とアルゴリズム
共立出版 2001 ISBN:4320055802

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Lectures and oral presentations (1)：

Evolutionary analysis of Mollicutes based on standardized phylogenetic tree
(2013)

Education (3)：

1993 - 1996 The Graduate University for Advanced Studies School of Life Science Department of Genetics
1990 - 1993 University of Tokyo School of Science Department of Biophysics and Biochemistry
1986 - 1990 Tokyo University Faculty of Science Department of Biophysics and Biochemistry

Professional career (2)：

Ph.D. in Genetics (The Graduate University for Advanced Studies)
Master.of Science (The University of Tokyo)

Work history (13)：

2019/04 - 現在 Hokkaido University Faculty of Information Science and Technology Professor
2016/12 - 現在 Hokkaido University
2020/04 - 2021/03 Hokkaido University
2020/04 - 2021/03 Hokkaido University
2004/04 - 2019/03 Hokkaido University Graduate School of Information Science and Technology Professor

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Committee career (15)：

2019/04 - 現在 Japanese Society for Bioinformatics Chair of Hokkaido Region
2016/12 - 現在数理・データサイエンス教育強化拠点コンソーシアム委員
2011/04 - 現在日本情報処理学会バイオ情報学研究会論文誌編集委員会
2011/04 - 現在日本情報処理学会バイオ情報学研究会運営委員会
2009 - 現在日本遺伝学会幹事

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Association Membership(s) (7)：

Japan Society of Bioinformatics , 生き物文化誌学会 , Genetics Society of Japan , 日本進化学会 , 日本情報処理学会 , Society for Molecular Biology and Evolution , 日本情報処理学会バイオ情報学研究会

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