Sugimura Kaoru

スギムラカオル | Sugimura Kaoru

Affiliation and department：
Homepage URL (1)： http://www.koolau.info/

Research field (3)： Bio-, chemical, and soft-matter physics , Biophysics , Developmental biology

Research keywords (8)： Bayesian Statistics , Drosophila , Pattern formation , morphogenesis , Soft matter , Mechanics , Actin cytoskeleton , Cell adhesion

Research theme for competitive and other funds (9)：

2018 - 2021 Development and application of continuum models for morphogenesis
2017 - 2020 Elucidating cell physical properties that determine the rate and directionality of cell rearrangement
2017 - 2019 Development of a new force inference method for cell competition studies
2015 - 2017 外力が駆動する細胞集団運動を支えるアクチン細胞骨格制御の解明
2014 - 2017 Modelling viscoelastic dynamics of organ morphogenesis and its numerical analysis

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Papers (43)：

Kaoru Sugimura, Tetsuhisa Otani. Vertex remodeling during epithelial morphogenesis. Current Opinion in Cell Biology. 2024. 91. 102427-102427
Xin Yan, Goshi Ogita, Shuji Ishihara, Kaoru Sugimura. Bayesian parameter inference for epithelial mechanics. 2024
Estelle Gauquelin, Keisuke Kuromiya, Toshinori Namba, Keisuke Ikawa, Yasuyuki Fujita, Shuji Ishihara, Kaoru Sugimura. Mechanical convergence in mixed populations of mammalian epithelial cells. The European physical journal. E, Soft matter. 2024. 47. 3. 21-21
Keisuke Ikawa, Souta Hiro, Shu Kondo, Shizue Ohsawa, Kaoru Sugimura. Coronin-1 promotes directional cell rearrangement in Drosophila wing epithelium. Cell structure and function. 2023
Keisuke Ikawa, Shuji Ishihara, Yoichiro Tamori, Kaoru Sugimura. Attachment and detachment of cortical myosin regulates cell junction exchange during cell rearrangement in the Drosophila wing epithelium. Current Biology. 2023. 33. 2. 263-275.e4

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MISC (5)：

石原秀至, 石原秀至, 杉村薫. Multi-scale Integration of Forces during Morphogenesis: Quantification and Mechanical Modeling Approaches. 生物物理(Web). 2020. 60. 1
杉村薫, 石原秀至. メカノバイオロジー IV.生体構造の力学モデリングとシミュレーション細胞と組織をつなぐ新しいクラスの連続体モデル. 生体の科学. 2019. 70. 4
石原秀至, 杉村薫. レクチャー理論生物学生命現象の解明にむけて Series vol.2 理論生物学研究の眺め方. 蛋白質核酸酵素. 2009. 54. 15
杉村薫, 上村匡, 望月敦史. 生命現象にみられるゆらぎ・振動・波樹状突起が空間を埋めるための自己組織化機構(Self-organizing Mechanism for Development of Space-filling Dendrites). 日本発生生物学会・日本細胞生物学会合同大会要旨集. 2007. 40回・59回. 25-25
服部佑佳子, 杉村薫, 上村匡. EBF/Olf-1ファミリーの転写制御因子Knot/Collierの選択的発現によるクラス特異的樹状形態形成(Selective Expression of Knot/Collier, a Transcriptional Regulator of the EBF/Olf-1 Family, Endowed a Class-specific Dendritic Morphogenesis). 日本発生生物学会・日本細胞生物学会合同大会要旨集. 2007. 40回・59回. 158-158

Books (3)：

機械学習を生命科学に使う! : シークエンスや画像データをどう解析し、新たな生物学的発見につなげるか?
羊土社 2020 ISBN:9784758103916
定量生物学 (DOJIN BIOSCIENCE SERIES)
化学同人 2018 ISBN:9784759817300
理論生物学の眺め方
共立出版 2011

Lectures and oral presentations (29)：

The mechanics of nature behind the multicellular tissue structure
(The 57th Annual Meeting of the Biophysical Society of Japan 2019)
細胞配置換え過程におけるアクチン脱重合因子を介した力感知・力抵抗機構
(第92回日本生化学会大会 2019)
数理と実験で解き明かす生体組織の成長メカニズム
(理化学研究所数理創造プログラム特別講演会 2018)
Quantifying and modelling epithelial morphogenesis.
(The Joint Meeting of the Society for Mathematical Biology and the Japanese Society for Mathematical Biology 2018)
Quantifying and modelling epithelial morphogenesis.
(iCeMS-iTHEMS Joint Workshop on Interdisciplinary Biology 2018)

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Professional career (1)：

Ph. D. (Kyoto University)

Work history (3)：

2021/01 - 現在 The University of Tokyo Department of Bioinformatics and Systems Biology, Faculty of Science Associate Professor
2017 - 2020/12 Kyoto University WPI-iCeMS
2011 - Kyoto University iCeMS

Awards (4)：

2023 - ナイスステップな研究者
2020 - 花王科学賞
2020 - 京都大学たちばな賞
2014 - 日本生物物理学会若手奨励賞

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