- 2022 - 2028 Platform for Advanced Genome Science
- 2021 - 2026 Suncus Research for Elucidating the Genetic Mechanism in Postoperative Nausea and Vomiting
- 2016 - 2021 先進ゲノム解析研究推進プラットフォーム
- 2013 - 2016 Development of the integrated technologies to analyze genomic bases of individuality
- 2010 - 2016 Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia
- 2012 - 2015 Development of denovo genome/gene assembler for highly heterozygous samples from NGS sequence data
- 2010 - 2011 Gene prediction and classification on the microbial metagenomes including fungal species
- 2005 - 2009 Comparative analysis of large scale genome data and knowledge discovery
- 2003 - 2005 The systematic approach for the understanding of dynamic aspects of chromosome VI of S.cerevisiae
- 2004 - 2004 比較ゲノム解析および遺伝子発現プロファイルに基づいたプロモータ情報構造の解析
- 1999 - 2003 真核生物染色体のS期に於ける動態の全て-出芽酵母第六染色体をモデルとして
- 2002 - 2002 比較ゲノム解析をベースとした機能領域探索法の開発
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