Nakaoka Shinji

ナカオカシンジ | Nakaoka Shinji

Affiliation and department：
Other affiliations (1)：

Homepage URL (2)： http://petadimension.org/ , http://altair.sci.hokudai.ac.jp/infmcb/index-e.html

Research field (4)： Biological, health, and medical informatics , Computational science , Applied mathematics and statistics , Basic mathematics

Research keywords (5)： mathematical biology , systems biology , bioinformatics , immune system , dynamical systems

Research theme for competitive and other funds (14)：

2021 - 2024 Construction of state transition model based on energy landscape
2021 - 2024 Development of an integrated model for estimating emerging infectious diseases and a method for allocating medical resources by integrating mathematical science and healthcare administration
2021 - 2024 PHRを活用した機械学習モデルによる心血管病の重症化予防を目指した研究
2020 - 2023 Emerging infectious diseases of bees in Japan: integrated risk assessment for conservation
2018 - 2021 包括的マルチオミクス解析によるウイルス感染ダイナミクスの時空間的理解

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Papers (82)：

Chizuru Kimura, Kazuhito Miura, Yutaka Watanabe, Haruhisa Baba, Kimiya Ozaki, Akira Hasebe, Tokiyoshi Ayabe, Kiminori Nakamura, Shinji Nakaoka, Katsuhiko Ogasawara, et al. Association between oral frailty and Prevotella percentage in the oral microbiota of community-dwelling older adults who participated in the CHEER Iwamizawa project, Japan. Journal of oral rehabilitation. 2024
Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, et al. Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers. PLOS Computational Biology. 2024. 20. 3. e1011238-e1011238
Asami Yamada, Jun-Ichirou Yasunaga, Lihan Liang, Wenyi Zhang, Junya Sunagawa, Shinji Nakaoka, Shingo Iwami, Yasunori Kogure, Yuta Ito, Keisuke Kataoka, et al. Anti-HTLV-1 immunity combined with proviral load as predictive biomarkers for adult T-cell leukemia-lymphoma. Cancer science. 2023
Daiki Kumakura, Ryo Yamaguchi, Akane Hara, Shinji Nakaoka. Disentangling the growth curve of microbial culture. Journal of Theoretical Biology. 2023. 573. 111597-111597
Akihiko Suzuki, Masaki Kamakura, Takuya Shiramata, Shinji Nakaoka, Yoshiko Sakamoto. Comparison of RNA-Seq analysis data between tracheal mite-infested and uninfested Japanese honey bees (Apis cerana japonica). BMC research notes. 2023. 16. 1. 122-122

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MISC (33)：

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Books (1)：

Education (4)：

2004 - 2007 Shizuoka University Graduate School of Science and Engineering
2002 - 2004 Osaka Prefecture University Graduate School of Engineering
1998 - 2002 Osaka Prefecture University School of Engineering Department of Mathematical Sciences
1995 - 1998 大阪府立三国丘高校

Professional career (1)：

Work history (11)：

2021/03 - 現在 Hokkaido University Faculty of Advanced Life Science Laboratory of mathematical biology Associate Professor
2016 - 2018 科学技術振興機構さきがけ専任研究員
2018 - 北海道大学大学院先端生命科学研究院特任講師
2016 - 2016 The University of Tokyo Institute of Industrial Science
2014 - 2016 東京大学大学院医学系研究科助教

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Committee career (1)：

Awards (1)：

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