Rchr
J-GLOBAL ID：201501004515420453
Update date: Sep. 29, 2024
Standley Daron Michaelangelo
Standley Daron Michaelangelo
Affiliation and department：
Research field (1)：
Structural biochemistry
Research theme for competitive and other funds (3)：
- 2018 - 2021 Identification of epitopes targeted by TCR-MHC pairs
- 2009 - 2011 Functional annotation of innate immunity proteins
- 2009 - 2010 水の媒介するATPゲートキーパーのシュミレーション
Papers (144)：
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Shuhei Sakakibara, Yu-Chen Liu, Masakazu Ishikawa, Ryuya Edahiro, Yuya Shirai, Soichiro Haruna, Marwa Ali El Hussien, Zichang Xu, Songling Li, Yuta Yamaguchi, et al. Clonal landscape of autoantibody-secreting plasmablasts in COVID-19 patients. Life science alliance. 2024. 7. 12. e202402774-e202402774
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Zichang Xu, Hendra S Ismanto, Dianita S Saputri, Soichiro Haruna, Guanqun Sun, Jan Wilamowski, Shunsuke Teraguchi, Ayan Sengupta, Songling Li, Daron M Standley. Robust detection of infectious disease, autoimmunity, and cancer from the paratope networks of adaptive immune receptors. Briefings in bioinformatics. 2024. 25. 5
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Takuya Uehata, Shinnosuke Yamada, Daisuke Ori, Alexis Vandenbon, Amir Giladi, Adam Jelinski, Yasuhiro Murakawa, Hitomi Watanabe, Kazuhiro Takeuchi, Kazunori Toratani, et al. Regulation of lymphoid-myeloid lineage bias through regnase-1/3-mediated control of Nfkbiz. Blood. 2024. 143. 3. 243-257
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Hiromichi Okuma, Yumiko Saijo-Hamano, Hiroshi Yamada, Aalaa Alrahman Sherif, Emi Hashizaki, Naoki Sakai, Takaaki Kato, Tsuyoshi Imasaki, Satoshi Kikkawa, Eriko Nitta, et al. Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I. Genes to cells : devoted to molecular & cellular mechanisms. 2024. 29. 1. 17-38
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Dianita S Saputri, Hendra S Ismanto, Dendi K Nugraha, Zichang Xu, Yasuhiko Horiguchi, Shuhei Sakakibara, Daron M Standley. Deciphering the antigen specificities of antibodies by clustering their complementarity determining region sequences. mSystems. 2023. 8. 6. e0072223
ｍore...
MISC (2)：
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Eiji Kanamori, Yuko Tsuchiya, Yoichi Murakami, Joy Sarmiento, Shide Liang, Daron Standley, Matsuyuki Shirota, Kengo Kinoshita, Haruki Nakamura. Prediction of Protein-Protein Complex Structures Using a Docking Server, surFit. PROTEIN SCIENCE. 2012. 21. 178-178
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Daron M. Standley, Haruki Nakamura. From structures to functions: annotation by structural bioinformatics. Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 2008. 53. 5. 638-644
Patents (3)：
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De-orphaning B cell responses to antigen
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Generalizable features for the diagnosis of disease from adaptive immune receptor repertoires
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Immunological Entity Clustering Software
Lectures and oral presentations (17)：
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Adaptive Immune Receptor Repertoires as Biomarkers for infection and disease
(Awaji International Forum on Infection and Immunity, Karuizawa, Japan 2023)
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Adaptive immune receptor repertoires as features for health and disease classification
(Bonn Conference on Mathematical Life Science 2023)
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Molecular Mechanism of SARS-CoV-2 Infection-Enhancing Antibodies”
(2022)
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Molecular Mechanism of SARS-CoV-2 Infection-Enhancing Antibodies”
(international Conference on Translational Omics and Bioinformatics:Advancing Reserach and Manufacturig for Medical Haalth 2022)
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Application of structural alignment in immunology
(PDBj-BINDS joint workshop: Protein and Compound Structural Data for Drug Discovery and Life Science 2020)
ｍore...
Education (2)：
- 1993 - 1998 Columbia University Chemistry
- 1989 - 1993 Harvey Mudd College Physics
Awards (1)：
- 2009/04 - Osaka University Prize for Outstanding Achievement in Education and Research
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