- 2023 - 2028 Integrative Bioarcheology: Reconstruction of Human Prehistory around the Japanese Archipelago
- 2023 - 2027 ホモ・サピエンスの卓越した狩猟技術の東ユーラシアへの波及と人口増加
- 2022 - 2026 縄文時代中期から後・晩期への社会変動に関する考古学とDNA分析の共同研究
- 2022 - 2025 Practical research on the restoration of Jomon society through collaboration between archeology and anthropology
- 2022 - 2025 Practical research on the restoration of Jomon society through collaboration between archeology and anthropology
- 2021 - 2025 A study for the construction and application of Jomon iPS cells
- 2021 - 2024 生物学教育における自然人類学の新しい展開と科目間連携の探索
- 2021 - 2024 Millennial-scale social sustainability in a piedmont canyon of Southeast Arabia: An interdisciplinary inquiry based on historical ecology
- 2021 - 2023 Development of food identification method by coprolite genome analysis
- 2021 - 2023 Multi-profiling of Jomon people's nutrition, hygiene, and health status by coprolite genome analysis
- 2021 - 2023 A study for peopling history of Yaponesians using the genome sequences of Jomon and Devisovan.
- 2020 - 2023 Overseas joint research to develop the base of Paleoproteomics
- 2020 - 2023 The reconstruction of transition and diversity of diet in Japan
- 2019 - 2022 Association between genetic polymorphisms of melatonin receptor and psycho-physiological effects of simulated night shift work
- 2018 - 2022 The Archaeological study on the formation of Clan society in Jomon age, the collaborative studies between Archaeology and Genomes Analysis
- 2018 - 2022 Reconstruction of Jomon social studies by interdisciplinary research among archaeology, anthropology and scientific studies on cultural properties.
- 2017 - 2021 Co-evolution of cold adaptability and immune function revealed from physiological function and genome analysis.
- 2016 - 2021 Integrated Research into the Processes and Mechanisms of Racialization
- 2019 - 2021 澎湖水道出土古人骨の全ゲノム解析
- 2019 - 2021 狩猟採集から農耕への移行と集団多様性の変化に関するゲノム研究
- 2017 - 2020 先史日本列島の糞石および歯石のメタゲノム解析
- 2017 - 2019 タイ北部少数民族に見る生業形態と文化・行動様式の集団遺伝学
- 2015 - 2018 Integrative sensory evolution in primates revealed by population genetic analysis of olfactory, taste, and color vision receptor genes
- 2013 - 2018 Evaluation of genetic and plastic adaptation from the perspective of genome, physiological polytypism and behavior in light environment.
- 2014 - 2017 Genetic and physiological factors that constitute cold adaptability in Japanese.
- 2013 - 2016 Construction and development the collaboration model between archaeologist and anthropologist by studying the human skeletons excavated from Hobi shell mound
- 2010 - 2016 A-Japan Based Global Study of Racial Representations
- 2013 - 2016 ヒトを含む類人猿の性的二型とその多様性を制御する分子機構の解明に向けて
- 2013 - 2015 古人骨DNA分析による縄文-弥生混血の検証
- 2012 - 2015 Establishment of methodology for assessment of disclosure risk and confidentiality of individual genome by random partition
- 2012 - 2015 琉球諸島と北部九州のヒト集団比較ゲノム解析~日本人の形成と環境適応の解明に向けて
- 2011 - 2014 Effect of the genetic factors to the physiological polytypisms of modern Japanese
- 2010 - 2014 Evolutionary diversity and adaption of sensory genes evaluated for natural populations of primates
- 2011 - 2014 次世代シークエンサーによる縄文および弥生時代人骨のゲノム解析
- 2009 - 2012 琉球諸島ヒト集団の網羅的ゲノム多様性解析~系統・形態・環境適応の解明に向けて~
- 2010 - 2012 Diversity of human life activity and phylogeny in the Japan Islands
- 2010 - 2012 Synthetic study of Jomon social structure by the collaboration between archaeology and anthropology
- 2009 - 2011 メダカを用いたヒト遺伝的多型の生体機能解析実験系の構築
- 2006 - 2010 Ancient Chinese : their Genetic Diversity and Life History
- 2007 - 2009 ゲノム情報を活用した人類学研究の新ストラテジー構築
- 2007 - 2009 Testing adaptive significance of primate color vision by behavioral and genetic studies of wild populations of New World monkeys
- 2006 - 2006 ネグリトの起源と適応に関する分子人類学的研究
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メダカ全身組織切片化研究会
, 小型魚類研究会
, SOCIETY OF ARCHAEOLOGICAL STUDIES
, 人類学交流会
, 国際分子進化生物学会
, 国際霊長類学会
, アメリカ人類遺伝学会
, JAPAN SOCIETY OF PHYSIOLOGICAL ANTHROPOLOGY
, THE JAPANESE ASSOCIATION OF ANATOMISTS
, THE JAPAN SOCIETY OF HUMAN GENETICS
, THE GENETICS SOCIETY OF JAPAN
, THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
, SOCIETY OF EVOLUTIONARY STUDIES, JAPAN
, PRIMATE SOCIETY OF JAPAN
, THE ANTHROPOLOGICAL SOCIETY OF NIPPON