SHIGEO SUGANO

スガノシゲオ | SHIGEO SUGANO

Affiliation and department：

Research field (3)： Plants: molecular biology and physiology , Systems genomics , Genomics

Research keywords (1)： Genome engineering, Plant Physiology, Genome editing

Research theme for competitive and other funds (6)：

2022 - 2025 Principal of on-chip mechno-index activated cell sorting for understanding protoplast regeneration
2022 - 2025 Information embedding in living organisms by electrically-induced bubbles and information transfer via functional interfaces
2018 - 2021 Development of genome editing technology for analysis of genetic redundancy in plants
2016 - 2018 Development of screening method using large deletion in Marchantia polymorpha
2013 - 2018 Evolutionary and molecuar genetic studies to logics in plant development

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Papers (30)：

Izumi Yotsui, Hidenori Matsui, Shingo Miyauchi, Hidekazu Iwakawa, Katharina Melkonian, Titus Schlüter, Santiago Michavila, Takehiko Kanazawa, Yuko Nomura, Sara Christina Stolze, et al. LysM-mediated signaling in Marchantia polymorpha highlights the conservation of pattern-triggered immunity in land plants. Current biology : CB. 2023. 33. 17. 3732-3746
Akiyoshi Nakamura, Tsubasa Yano, Nobutaka Mitsuda, Maiko Furubayashi, Seiichiro Ito, Shigeo S Sugano, Teruhiko Terakawa. The sonication-assisted whisker method enables CRISPR-Cas9 ribonucleoprotein delivery to induce genome editing in rice. Scientific reports. 2023. 13. 1. 14205-14205
Sachie Kimura, Aleksia Vaattovaara, Tomoya Ohshita, Kotomi Yokoyama, Kota Yoshida, Agnes Hui, Hidetaka Kaya, Ai Ozawa, Mami Kobayashi, Izumi C. Mori, et al. Zinc deficiency-induced defensin-like proteins are involved in the inhibition of root growth in Arabidopsis. PLANT JOURNAL. 2023
Taro Maeda, Shigeo S Sugano, Makoto Shirakawa, Mayu Sagara, Toshiro Ito, Satoshi Kondo, Atsushi J Nagano. Single-Cell RNA Sequencing of Arabidopsis Leaf Tissues Identifies Multiple Specialized Cell Types: Idioblast Myrosin Cells and Potential Glucosinolate-Producing Cells. Plant and Cell Physiology. 2023. 64. 2. 234-247
Haruaki Kobayashi, Kazuaki Murakami, Shigeo S. Sugano, Kentaro Tamura, Yoshito Oka, Tomonao Matsushita, Tomoo Shimada. Comprehensive analysis of peptide-coding genes and initial characterization of an LRR-only microprotein in Marchantia polymorpha. FRONTIERS IN PLANT SCIENCE. 2023. 13

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MISC (10)：

沢津橋俊, 上甲裕大, 菅野茂夫. クローズアップ実験法(series 312) 培養細胞における簡便なノックインを可能とするゲノム編集法 VIKING法. 実験医学. 2019. 37. 11. 1825-1831
Kondo Y, Sugano SS. Opening new avenues for plant developmental research. J Plant Res. 2017
藤本聡, 菅野茂夫, 刑部敬史, 松永幸大. TALエフェクターを用いたシロイヌナズナクロマチンの可視化. 日本植物学会大会研究発表記録. 2015. 79th. 178
上田梨紗, 石原諒典, 阿部千尋, 渡辺崇人, 菅野茂夫, 宮脇克行, 野地澄晴, 刑部祐里子, 刑部敬史. CRISPR/Cas9によるトマトIAA9遺伝子を標的としたゲノム編集技術の確立. 日本生化学会大会(Web). 2015. 88th. 4T21L-08(3P0837) (WEB ONLY)-08(3P0837)]
川瀬貴士, 菅野茂夫, 嶋田知生, 西村いくこ. Nile-red-in-silicone-oil染色法と方向選択的局所二値化法(DSLT)による葉内三次元構造の抽出. 日本生化学会大会(Web). 2015. 88th

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Books (2)：

Handbook of Biologically Active Peptides 2nd edition. Section I: Plant Peptides Chapter 13 - Stomagen/EPFL9
Academic Press 2013 ISBN:9780123850959
Ecology by genomics
Bun'ichi Sogo Shuppan 2011

Lectures and oral presentations (18)：

Development of versatile modules for NHEJ-based knock-in and optimization of the ratio of donor and cleavage vectors
(Cold Spring Harbor Laboratory, CRISPR: the revolution 2017 2017)
Genome editing of haploid species
(第58回日本植物生理学会年会シンポジウム、鹿児島大学郡元キャンパス 2017)
High throughput genome editing in a haploid dominant species, Marchantia polymorha
(日本植物学会第80回年会,沖縄コンベンションセンター, 2016)
Efficient CRISPR/Cas9-mediated genome editing vectors in Marchantia polymorpha for high throughput screening
(Plant Genome Stability and Change 2016, Shonan, Japan 2016, July 9 2016)
Trial of cell sorting in Coprinopsis cinerea
(第 15 回糸状菌分子生物学コンファレンス 2015)

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Education (2)：

- 2013 Kyoto University, Graduate School of Science
- 2008 Kyoto University Faculty of Science

Professional career (1)：

Dc. Sci. (Kyoto University)

Work history (7)：

2019/04 - 現在 National Institute of Advanced Industrial Science and Technology Bioproduction institute Plant gene regulation group Senior research scientist
2017/04 - 2019/03 Ritsumeikan University, R-GIRO, Assistant Professor
2016/04/01 - 2017/03/31 JST PRESTO Researcher
2015/12/01 - 2016/03/31 Japan Science and Technology Agency
2014/04/01 - 2016/03/31 Tokushima University CCAIC・Project Assistant Professor

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Awards (2)：

2013/09 - The Japanese Biochemical Society Best presentation award in the Japanese Biochemical Society
2010/03 - Kyoto University Kyoto University President Award

Association Membership(s) (2)：

Japanese Society of Plant Biotechnology , JSPP

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