Mori Toshifumi

モリトシフミ | Mori Toshifumi

Affiliation and department：
Other affiliations (1)：

Kyushu University Interdisciplinary Graduate School of Engineering Sciences

Homepage URL (2)： https://theoc.cm.kyushu-u.ac.jp , https://theoc.cm.kyushu-u.ac.jp/en/

Research field (2)： Biophysics , Basic physical chemistry

Research keywords (10)： Pin1 , KaiC , reaction dynamics , Folding , Molecular Simulation , Enzymatic Reaction , Quantum Chemistry , Physical Biology , Theoretical Chemistry , Physical Chemistry

Research theme for competitive and other funds (8)：

2022 - 2026 Theoretical study on the molecular mechanism of conformational transitions and catalysis in enzymes
2020 - 2025 Development of DYASIN: Novel Approach to Enantioenriched Chiral Molecules
2023 - 2023 酵素反応の動的反応理論の開拓
2018 - 2021 酵素反応の動的機構の理論的解明
2015 - 2018 Molecular study of the heterogeneous dynamics behind structure and function in proteins

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Papers (33)：

Akira Shiozuka, Di Wu, Kyohei Kawashima, Toshifumi Mori, Kohei Sekine, Yoichiro Kuninobu. Carbamoylarylation of Alkenes with N-Aryl Oxamic Acids Involving 1,4-Aryl Migration Via C(aryl)-N Bond Cleavage. ACS Catalysis. 2024
Yoshihiko Furuike, Yasuhiro Onoue, Shinji Saito, Toshifumi Mori, Shuji Akiyama. The priming phosphorylation of KaiC is activated by the release of its autokinase autoinhibition. 2024
Junichi Ono, Yoshihiro Matsumura, Toshifumi Mori, Shinji Saito. Conformational Dynamics in Proteins: Entangled Slow Fluctuations and Nonequilibrium Reaction Events. The Journal of Physical Chemistry B. 2023
Toshifumi Mori, Norio Yoshida. Tuning the ATP-ATP and ATP-disordered protein interactions in high ATP concentration by altering water models. The Journal of Chemical Physics. 2023
Sirin Sittiwanichai, Deanpen Japrung, Toshifumi Mori, Prapasiri Pongprayoon. Structural and Dynamic Alteration of Glycated Human Serum Albumin in Schiff Base and Amadori Adducts: A Molecular Simulation Study. The Journal of Physical Chemistry B. 2023

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MISC (6)：

Toshifumi Mori, Shinji Saito. Static and Dynamic Roles of Proteins in Proline Isomerization Reactions. BIOPHYSICAL JOURNAL. 2017. 112. 3. 498A-498A
Toshifumi Mori, Shinji Saito. Dynamic Heterogeneity and the Role of Non-Native Contacts in the Protein Folding/Unfolding Transitions. BIOPHYSICAL JOURNAL. 2016. 110. 3. 361A-361A
MUKAIYAMA Atsushi, MUKAIYAMA Atsushi, ABE Jun, HIYAMA Takuya, SON Seyoung, MORI Toshifumi, MORI Toshifumi, SAITO Shinji, SAITO Shinji, OSAKO Masato, et al. Circadian timing governed by cyanobacterial KaiC ATPase. 生物物理(Web). 2015. 55. Supplement 1-2
Toshifumi Mori, Shinji Saito. Theoretical Study of the Protein Folding Dynamics from a Time Correlation Function Approach. BIOPHYSICAL JOURNAL. 2015. 108. 2. 211A-211A
Toshifumi Mori, Robert J. Hamers, Joel A. Pedersen, Qiang Cui. An Explicit Consideration of Desolvation is Critical to Binding Free Energy Calculations of Charged Molecules at Ionic Surfaces (vol 9, pg 5059, 2013). JOURNAL OF CHEMICAL THEORY AND COMPUTATION. 2014. 10. 12. 5738-5738

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Lectures and oral presentations (9)：

Theoretical study on the role of dynamics during enzyme catalysis
(Pure and Applied Chemistry International Conference 2024 2024)
Theoretical study on the role of protein conformational dynamics during enzyme catalysis
(2023)
Bridging the gap between static and dynamic reaction mechanisms in enzyme catalysis
(Multi-scale Molecular Dynamics Simulation and Machine Learning of Biomolecular Systems Workshop 2023)
Dissecting the heterogeneous dynamics of proteins during folding and catalysis
(Telluride Science Research Center Workshop on Protein Dynamics 2023)
Elucidating the Role of Dynamics During Enzyme Catalysis using Molecular Simulations
(7th International Symposium of Quantum Beam Science at Ibaraki University 2022)

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Education (2)：

2007 - 2010 Kyoto University Graduate School of Science Department of Chemistry
2005 - 2007 Kyoto University Graduate School of Science Department of Chemistry

Professional career (1)：

博士(理学) (京都大学)

Work history (7)：

2020/10 - 現在 Kyushu University Interdisciplinary Graduate School of Engineering Sciences Associate Professor
2020/10 - 現在 Kyushu University Institute for Materials Chemistry and Engineering, Division of Applied Molecular Chemistry Associate Professor
2014/04 - 2020/09 Graduate University for Advanced Studies Assistant Professor
2013/12 - 2020/09 Institute for Molecular Science
2013/04 - 2013/11 University of Wisconsin - Madison Department of Chemistry JSPS Postdoctoral Fellow for Research Abroad

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Awards (5)：

2018/09 - Japan Society for Molecular Science Young Scientist Award Theoretical study of reaction dynamics in gas phase and condensed phase
2017/09 - The Biophysical Society of Japan Early Career Presentation Award Crucial role of enzyme dynamics in the catalytic reaction mechanism of Pin1
2012/06 - International Congress of Quantum Chemistry 14th ICQC Poster Prize Beyond Minimum Energy Conical Intersections: Paths in Conical Intersection Seam Space and their Role in Nonadiabatic Dynamics
2011/09 - 分子科学会第5回分子科学討論会優秀講演賞エチレンの光化学反応におけるRydberg状態の研究 ~第一原理計算によるダイナミクスと光イオン化スペクトルについて~
2008/09 - The World Association of Theoretical and Computational Chemists WATOC 2008 Poster Prize The Reaction of a Grignard Reagent with Acetone in Solution: A Theoretical Study

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