Rchr
J-GLOBAL ID：201601009792262377
Update date: Oct. 08, 2024
Taiji Kawakatsu
カワカツ タイジ | Taiji Kawakatsu
Affiliation and department：
Job title：
Principal Scientist
Research field (4)：
Plants: molecular biology and physiology
, Genomics
, Applied molecular and cellular biology
, Plant genetics and breeding
Research keywords (5)：
rice
, endosperm
, transcription factor
, epigenome
, transcriptional regulation
Research theme for competitive and other funds (11)：
- 2023 - 2028 Support activities to promote plant-climate feedbacks
- 2023 - 2028 BVOC放出とストレス耐性を連動させるエピゲノム分子基盤の解明
- 2023 - 2026 Single-cell analysis to understand gene regulatory system in crops
- 2022 - 2026 カキのゲノム進化に基づく果実の形状多様性獲得モデルの構築
- 2022 - 2025 Molecular mechanisms of ERF transcription factor-mediated adaptation to abiotic stresses
- 2019 - 2021 Epigenetic regulatory mechanisms in seed maturation
- 2017 - 2020 The regulatory DNA Landscape in the rice endosperm
- 2017 - 2019 Hybridization barrier regulated by epigenomes during grain filling in rice
- 2015 - 2018 Epigenomic change induced by Agrobacterium infection
- 2010 - 2012 イネ胚乳品質を制御する転写ネットワークの解明
- 2007 - 2009 Development of host rice as a bioreacter for high value recombinant protein production
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Papers (44)：
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Ryokei Tanaka, Tsubasa Kawai, Taiji Kawakatsu, Nobuhiro Tanaka, Matthew Shenton, Shiori Yabe, Yusaku Uga. Transcriptome-based prediction for polygenic traits in rice using different gene subsets. BMC genomics. 2024. 25. 1. 915-915
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Kaoru Tonosaki, Akemi Ono, Hiroki Nagata, Hiroyasu Furuumi, Ken-ichi Nonomura, Yutaka Sato, Luca Comai, Katsunori Hatakeyama, Taiji Kawakatsu, Tetsu Kinoshita. Multi-layered epigenetic control of persistent and stage-specific imprinted genes in rice endosperm. Nature plants. 2024
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Yuhya Wakasa, Taiji Kawakatsu, Ken Ishimaru, Kenjirou Ozawa. Generation of major glutelin-deficient (GluA, GluB, and GluC) semi-dwarf Koshihikari rice line. Plant cell reports. 2024. 43. 2. 51-51
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Shujun Wei, Ryokei Tanaka, Taiji Kawakatsu, Shota Teramoto, Nobuhiro Tanaka, Matthew Shenton, Yusaku Uga, Shiori Yabe. Genome- and Transcriptome-wide Association Studies to Discover Candidate Genes for Diverse Root Phenotypes in Cultivated Rice. Rice. 2023. 16. 1
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Fumiyuki Soma, Yuka Kitomi, Taiji Kawakatsu, Yusaku Uga. Life-cycle multiomics of rice shoots reveals growth stage-specific effects of drought stress and time-lag drought responses. Plant & cell physiology. 2023
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MISC (9)：
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Haruki Nishio, Taiji Kawakatsu, Nobutoshi Yamaguchi. Beyond heat waves: Unlocking epigenetic heat stress memory in Arabidopsis. Plant physiology. 2023
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Taiji Kawakatsu. RNA-Directed DNA Methylation Links Viral Disease and Plant Architecture in Rice. Molecular plant. 2020. 13. 6. 814-816
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Kawakatsu T. Whole-Genome Bisulfite Sequencing and Epigenetic Variation in Cereal Methylomes. Methods in molecular biology (Clifton, N.J.). 2020. 2072. 119-128
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Kanami Yoshino, Yuko Numajiri, Shota Teramoto, Naoki Kawachi, Takanari Tanabata, Tsuyoshi Tanaka, Takeshi Hayashi, Taiji Kawakatsu, Yusaku Uga. Towards a deeper integrated multi-omics approach in the root system to develop climate-resilient rice. Molecular Breeding. 2019. 39. 165
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Kawakatsu T, Ecker JR. Diversity and dynamics of DNA methylation: epigenomic resources and tools for crop breeding. Breeding science. 2019. 69. 2. 191-204
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Patents (2)：
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Gene capable of being expressed specifically in endosperm of plant, promoter for the gene, and use of the gene and the promoter
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植物の内胚乳に特異的に発現する遺伝子および該遺伝子のプロモーター、並びにそれらの利用
Lectures and oral presentations (6)：
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Comparative analysis of the transcriptomes under drought condition between rice varieties with distinct root system architecture
(育種学研究 2021)
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Phenome analysis on root traits of world-wide rice varieties in the upland field
(育種学研究 2021)
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Comprehensive search for gravity-responsive genes of rice root tip after simulated microgravity condition generated by a three-dimensional clinostat
(育種学研究 2021)
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Nanopore sequencingとLinked-read sequencingによるインディカ水稲品種「IR64」ゲノムのde novoアセンブリ
(育種学研究 2018)
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イネbZIP型転写因子RISBZ1とDOF型転写因子RPBFの種子登熟における補償作用および相互作用
(日本植物生理学会年会要旨集 2010)
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Education (2)：
- 2001 - 2006 University of Tokyo Graduate School of Agricultural and Life Sciences Agricultural and Environmental Biology
- 1997 - 2001 University of Tokyo Faculty of Agriculture Agricultural and Environmental Biology
Professional career (1)：
- ph.D. (University of Tokyo)
Work history (7)：
- 2021/04 - 現在 National Agriculture and Food Research Organization Institute of Agrobiological Sciences, NARO Principal Scientist
- 2019/10 - 2021/03 National Agriculture and Food Research Organization Institute of Agrobiological Sciences, NARO Principal Scientist
- 2016/04 - 2019/09 National Agriculture and Food Research Organization Institute of Agrobiological Sciences, NARO, Division of Biotechnology, Plant Molecular Farming Unit Senior Researcher
- 2011/04 - 2016/03 National Institute of Agrobiological Sciences Genetically Modified Organism Research Center, Functional Transgenic Crop Research Unit Principal Researcher
- 2012/10 - 2014/10 Salk Institute for Biological Studies Plant Molecular Biology/Genomic Analysis Lab Research Associate
- 2011/04 - 2012/03 National Institute of Agrobiological Sciences Deputy Research Director
- 2006/04 - 2011/03 National Institute of Agrobiological Sciences Transgenic Crop Research and Development Center Researcher
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Committee career (2)：
- 2022 - 現在 Plant and Cell Physiology Editor
- 2018/09 - 現在 植物インフォマティクス研究会 運営委員
Awards (1)：
- 2018/04 - The Commendation for Science and Technology by the Minister of Education, Culture, Sports, Science and Technology The Young Scientists’ Prize Epigenomic diversity and dynamics in plants
Association Membership(s) (2)：
JAPANESE SOCIETY OF BREEDING
, The Japanese Society of Plant Physiologists
