Mizuguchi Tomoko

Affiliation and department：
Homepage URL (1)： http://www.cis.kit.ac.jp/~senzai/

Research field (1)： Bio-, chemical, and soft-matter physics

Research theme for competitive and other funds (3)：

2019 - 2022 反応分子動力学法を用いた炭素構造体中の過冷却水のダイナミクス解析
2015 - 2019 Clarification of the mechanisms of organic nanotubes and nanovesicles by large-scale molecular simulation
2010 - 2011 単成分系のガラス転移ダイナミクスおよびポリアモルフィズム

Papers (22)：

Ryunosuke Yonemori, Tomoko Mizuguchi, Takeshi Hasegawa. Effects of Chain Length on the Self-assembled Structure of Perfluoroalkyl Oligomers. Transaction of the Japan Society for Simulation Technology. 2024. 16. 1. 24-31
Mao Fukuyama, Tomoko Mizuguchi, Piangrawee Santivongskul, Yuri Ono, Motohiro Kasuya, Arinori Inagawa, Akihide Hibara. Kinetic description of water transport during spontaneous emulsification induced by Span 80. Nanoscale. 2024. 16. 8. 4056-4062
T Mizuguchi, T Odagaki. Determination of cooperatively rearranging regions in a binary glass former. Journal of Physics: Condensed Matter. 2023. 35. 33. 334003
Yuri Ono, Tomoko Mizuguchi, Mao Fukuyama. Analysis of Hydrogen Bonds inside Span 80 Reverse Micelles by Molecular Dynamics Simulations. Transaction of the Japan Society for Simulation Technology. 2023. 15. 2. 36-41
Tomoko Mizuguchi, Naoto Fukushima, Takashi Aoki, Susumu Fujiwara, Masato Hashimoto. The study on the stability of DNA structure by steered molecular dynamics simulations. Journal of Advanced Simulation in Science and Engineering. 2022. 9. 1. 160-169

ｍore...

MISC (4)：

水口朋子. 反応力場ReaxFFを用いたシリカ細孔内の水に関する分子動力学シミュレーション. 日本シミュレーション学会誌. 2023. 42. 3
O. Takarada, O. Ichikawa, K. Yamazaki, K. Fujimoto, T. Mizuguchi, A. Yamada, S. Okazaki. Protein-ligand binding affinity calculation by replica exchange thermodynamic integration. HPCI Research Report. 2017. 2. 53
TOMOKO MIZUGUCHI, NOBUYUKI MATUBAYASI. Effect of Diffuseness of Micelle Boundary on the Solute Bound to Micelle. Sen'i Gakkaishi. 2016. 72. 5. P-266-P-269
水口朋子. 1成分単純液体のガラス転移. アンサンブル. 2012. 14. 3. 154-159

Lectures and oral presentations (72)：

脱塩基部位を有する損傷DNAの分子動力学シミュレーション
(第73回高分子学会年次大会 2024)
トラッピング拡散モデルにおけるエージング現象の待ち時間依存性
(日本物理学会2024年春季大会 2024)
Molecular dynamics simulations for the aggregate structures of perfluoroalkyl oligomers
(Pittcon2024 2024)
Molecular dynamics study of tacticity effect of polymer brushes on alanine dipeptide adsorption
(9th International Symposium on BioComplexity 2024)
Molecular dynamics simulation of fluorescent dye-labeled DNA with apurinic/apyrimidinic sites
(9th International Symposium on BioComplexity 2024)

ｍore...

Education (3)：

2008 - 2011 Kyushu University Graduate School of Sciences Department of Physics
2006 - 2008 Kyushu University Graduate School of Sciences Department of Chemistry and Physics of Condensed Matter
2001 - 2006 Tokyo University of Science

Professional career (1)：

博士(理学) (九州大学)

Work history (12)：

2020/03 - 現在 Kyoto Institute of Technology Faculty of Materials Science and Engineering Associate Professor
2023/08 - 2024/02 FAU Erlangen-Nürnberg Institute for Multiscale Simulation Guest Researcher
2018/04 - 2020/02 Kyoto Institute of Technology Graduate School of Science and Technology Assistant Professor
2015/03 - 2018/03 Kyoto Institute of Technology Assistant Professor
2014/07 - 2015/02 Nagoya University

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Committee career (5)：

2022/07 - 現在日本シミュレーション学会理事
2022/05 - 現在日本シミュレーション学会日本シミュレーション学会誌編集委員
2019/11 - 現在 JASSE co-chief guest editor
2024/04 - 2025/03 日本物理学会領域運営委員
2020/07 - 2022/07 日本シミュレーション学会代議員

Awards (3)：

2017/10 - 日本シミュレーション学会研究賞
2016/10 - Japan Society for Simulation Technology JSST2016 Outstanding Presentation Award
2009/12 - 分子シミュレーション研究会第23回分子シミュレーション討論会学生優秀発表賞

Association Membership(s) (4)：

THE MOLECULAR SIMULATION SOCIETY OF JAPAN , JAPAN SOCIETY FOR SIMULATION TECHNOLOGY , THE PHYSICAL SOCIETY OF JAPAN , THE SOCIETY OF POLYMER SCIENCE, JAPAN

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