Shimpei Kubota

Affiliation and department：

Research field (3)： Pharmacology , Experimental pathology , Systems genomics

Research keywords (2)：合成生物学 , Tissue clearing

Research theme for competitive and other funds (4)：

Papers (21)：

Seiichiro Naito, Hiroki Tanaka, Jing-Jing Jiang, Masato Tarumi, Ari Hashimoto, Yuki Tanaka, Kaoru Murakami, Shimpei I. Kubota, Shintaro Hojyo, Shigeru Hashimoto, et al. DDX6 is involved in the pathogenesis of inflammatory diseases via NF-κB activation. Biochemical and Biophysical Research Communications. 2024. 703. 149666-149666
Iori Tamura, Daichi M. Sakamoto, Bo Yi, Yutaro Saito, Naoki Yamada, Jumpei Morimoto, Yoichi Takakusagi, Masafumi Kuroda, Shimpei I. Kubota, Hiroshi Harada, et al. Click3D: A whole-organ 3D imaging method utilizing tissue clearing-compatible click reaction. 2024
Daichi M. Sakamoto, Iori Tamura, Bo Yi, Sho Hasegawa, Yutaro Saito, Naoki Yamada, Yoichi Takakusagi, Shimpei I. Kubota, Minoru Kobayashi, Hiroshi Harada, et al. Whole-Body and Whole-Organ 3D Imaging of Hypoxia Using an Activatable Covalent Fluorescent Probe Compatible with Tissue Clearing. ACS Nano. 2024. 18. 6. 5167-5179
Kaoru Murakami, Shimpei I. Kubota, Kumiko Tanaka, Hiroki Tanaka, Keiichiroh Akabane, Rigel Suzuki, Yuta Shinohara, Hiroyasu Takei, Shigeru Hashimoto, Yuki Tanaka, et al. High-precision rapid testing of omicron SARS-CoV-2 variants in clinical samples using AI-nanopore. Lab on a Chip. 2023. 23. 22. 4909-4918
Reiji Yamamoto, Satoshi Yamada, Toru Atsumi, Kaoru Murakami, Ari Hashimoto, Seiichiro Naito, Yuki Tanaka, Izuru Ohki, Yuta Shinohara, Norimasa Iwasaki, et al. Computer model of IL-6-dependent rheumatoid arthritis in F759 mice. International Immunology. 2023

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MISC (21)：

久保田晋平, 高橋恵生, 田井中一貴, 江幡正悟, 上田泰己, 宮園浩平. Whole-organ pathological profiling with single-cell resolution. 日本病理学会会誌. 2021. 110. 1
竹山春子, 細川正人. シングルセル解析でなにがわかるか. 組織透明化を用いた全身全細胞解析の最前線. 2020
久保田晋平, 高橋恵生, 西田純, 江幡正悟, 宮園浩平. Whole-organ quantitative analysis of cancer metastasis with single cell resolution. 日本癌学会学術総会抄録集(Web). 2020. 79th
Shimpei I. Kubota, Takahashi Kei, Nishida Jun, Ehata Shogo, Tanaka Kabuki, Ueda Hiroki R., Miyazono Kohei. Whole-organ profiling of cancer metastasis by tissue clearing and light-sheet fluorescent microscopy. Proceedings for Annual Meeting of The Japanese Pharmacological Society. 2020. 93. 0. 1-YIA-16
高橋和樹, 井上カタジナアンナ, 戒田篤志, 高橋恵生, 久保田晋平, 須河内昭成, 内橋俊大, 田中晋, 古郷幹彦, 三浦雅彦, et al. TGF-βにより細胞周期が停止した口腔扁平上皮がん細胞の運動能ならびに転移能は亢進する(TGF-β-induced cell cycle arrest is associated with increased migration and metastasis of oral squamous carcinoma cells). 日本癌学会総会記事. 2019. 78回. J-3010

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Lectures and oral presentations (8)：

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Professional career (1)：

Work history (6)：

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Awards (12)：

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