Rchr
J-GLOBAL ID：201801012202851521
Update date: Sep. 29, 2024
Katoh Kazutaka
カトウ カズタカ | Katoh Kazutaka
Affiliation and department：
Research field (1)：
Evolutionary biology
Research theme for competitive and other funds (4)：
- 2020 - 2024 MAFFT多重配列アラインメントプログラムの機能拡張
- 2016 - 2021 Extension of MAFFT multiple sequence alignment program mainly for large data
- 2009 - 2011 Extension of the MAFFT algorithm to RNA and protein structural multiple alignment
- 2005 - 2009 A study on the origin and evolution of multicellular animals
Papers (56)：
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Scott V Edwards, Alison Cloutier, Glenn Cockburn, Robert Driver, Phil Grayson, Kazutaka Katoh, Maude W Baldwin, Timothy B Sackton, Allan J Baker. A nuclear genome assembly of an extinct flightless bird, the little bush moa. Science advances. 2024. 10. 21. eadj6823
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Shimpei Kawamoto, Ken Uemura, Nozomi Hori, Lena Takayasu, Yusuke Konishi, Kazutaka Katoh, Tomonori Matsumoto, Masae Suzuki, Yusuke Sakai, Tatsuyuki Matsudaira, et al. Bacterial induction of B cell senescence promotes age-related changes in the gut microbiota. Nature cell biology. 2023. 25. 6. 865-876
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Daron M Standley, Tokuichiro Nakanishi, Zichang Xu, Soichiro Haruna, Songling Li, Sedat Aybars Nazlica, Kazutaka Katoh. The evolution of structural genomics. Biophysical reviews. 2022. 14. 6. 1247-1253
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Nariko Ikemura, Shunta Taminishi, Tohru Inaba, Takao Arimori, Daisuke Motooka, Kazutaka Katoh, Yuhei Kirita, Yusuke Higuchi, Songling Li, Tatsuya Suzuki, et al. An engineered ACE2 decoy neutralizes the SARS-CoV-2 Omicron variant and confers protection against infection in vivo. Science translational medicine. 2022. 14. 650. eabn7737
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Ryutaro Furukawa, Shin-Ichi Yokobori, Riku Sato, Taimu Kumagawa, Mizuho Nakagawa, Kazutaka Katoh, Akihiko Yamagishi. Amino Acid Specificity of Ancestral Aminoacyl-tRNA Synthetase Prior to the Last Universal Common Ancestor Commonote commonote. Journal of molecular evolution. 2022. 90. 1. 73-94
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MISC (4)：
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Kazutaka Katoh. Preface. Methods in Molecular Biology. 2021. 2231. v-vii
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Keiichi Kuma, Naoyuki Iwabe, Kazutaka Katoh, Hiroyuki Toh, Nozomi Hirose, Go Sasaki, Hiroshi Suga, Takashi Miyata, Yutaka Suzuki, Masahiro Kasahara, et al. Genome sequencing project of a choanoflagellate, Monosiga ovata: I. Genome structure. GENES & GENETIC SYSTEMS. 2009. 84. 6. 449-449
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Kazutaka Katoh, Hiroyuki Toh. PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences. GENES & GENETIC SYSTEMS. 2007. 82. 6. 539-539
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西頼広美, 菅裕, 小柳(小野)香奈子, 加藤和貴, 近藤準一, 春本晃江, 高木由臣, 岩部直之, 宮田隆. プロテインチロシンホスファターゼ(PTP)遺伝子族の多様化. 日本遺伝学会大会プログラム・予稿集. 2001. 73rd
Lectures and oral presentations (4)：
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Annotation of VDJ genes in TCR loci on eutherian genome
(日本進化学会第25回年会シンポジウム「Evolutionary analysis software in the era of large-scale data」 2023)
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Off-plan use of technology
(日本進化学会第24回年会シンポジウム「マルチプルアラインメントの進化~MAFFT発表から20年を経て~」 2022)
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抗原抗体複合体予測における多重配列アラインメントの利用について
(国立遺伝学研究所研究集会「生命科学を支える分子系統学」 2022)
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Multiple Sequence Alignment for Predicting Antigen-Antibody Interactions
(Workshop "Computational Challenges in Very Large-Scale 'Omics'", UC Berkeley 2022)
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