Uriu Koichiro

ウリウコウイチロウ | Uriu Koichiro

Affiliation and department：
Homepage URL (1)： https://sites.google.com/view/uriu-lab/home

Research field (2)： Developmental biology , Animals: biochemistry, physiology, behavioral science

Research theme for competitive and other funds (7)：

2020 - 2023 Analysis of gene expression rhythms in a population of mobile cells
2019 - 2021 Phase response theory of the circadian clocks and its experimental validation
2019 - 2021 Synchronization of developmental clock under tissue deformation
2017 - 2019 Spatiotemporal dynamics of developmental clocks: mathematical modeling of resynchronization process of the segmentation clock
2014 - 2017 Mathematical modeling of collective cell movement

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Papers (26)：

Koichiro Uriu, Juan P Hernandez-Sanchez, Shihoko Kojima. Impacts of the feedback loop between sense-antisense RNAs in regulating circadian rhythms. NPJ systems biology and applications. 2024. 10. 1. 119-119
Taijiro Yabe, Koichiro Uriu, Shinji Takada. Ripply suppresses Tbx6 to induce dynamic-to-static conversion in somite segmentation. Nature communications. 2023. 14. 1. 2115-2115
Koichiro Uriu, Luis G Morelli. Orchestration of tissue shape changes and gene expression patterns in development. Seminars in cell & developmental biology. 2023
Yuta Kitaguchi, Hajime Tei, Koichiro Uriu. Cell size homeostasis under the circadian regulation of cell division in cyanobacteria. Journal of theoretical biology. 2022. 111260-111260
Koichiro Uriu, Hajime Tei. Complementary phase responses via functional differentiation of dual negative feedback loops. PLoS computational biology. 2021. 17. 3. e1008774

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MISC (3)：

Marcos Wappner, Koichiro Uriu, Andrew C. Oates, Luis G. Morelli. Multiple Notch ligands in the synchronization of the segmentation clock. bioRxiv. 2024
Koichiro Uriu, Luis G. Morelli. Statistical description of mobile oscillators in embryonic pattern formation. bioRxiv. 2024
Olivier F. Venzin, Chloé Jollivet, Nicolas Chiaruttini, Olga Rosspopoff, Clément Helsens, Luis G. Morelli, Koichiro Uriu, Andrew C. Oates. Clock driven waves of Tbx6 expression prefigure somite boundaries. bioRxiv. 2023

Lectures and oral presentations (3)：

Mathematical mechanism for converting temporal rhythm of segmentation clock into spatial pattern of somites
(The 2024 annual meeting of the Japanese Society for Mathematical Biology 2024)
From local synchronization by Delta-Notch signaling to global pattern formation: mathematical modeling of vertebrate segmentation clock
(The 44th Annual Meeting of the Molecular Biology Society of Japan 2021)
Dead zone formation by negative feedback loops in the circadian clocks
(2018 Annual Meeting of the Society for Mathematical Biology & the Japanese Society for Mathematical Biology 2018)

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