Nishiyama Soichiro

Affiliation and department：

Research field (1)： Horticulture

Research keywords (3)：果樹園芸学 , 倍数性 , 遺伝

Research theme for competitive and other funds (9)：

2020 - 2025 作物科学研究へのパラダイムシフトを誘起するカキ属植物の研究加速化のための基盤形成
2021 - 2024 エピジェネティックなトランスポゾン時空間特異的転移制御による果実発達機構の解明
2021 - 2024 完全甘ガキ性決定遺伝子の同定と機能解析
2019 - 2024 Establishment of the consumer-oriented breeding system in blueberry based on genomic and cognitive sciences
2022 - 2024 ゲノミクスと果実フェノミクスに基づく倍数体果樹育種の新展開

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Papers (23)：

Peng Sun, Soichiro Nishiyama, Huawei Li, Yini Mai, Weijuan Han, Yujing Suo, Chengzhi Liang, Huilong Du, Songfeng Diao, Yiru Wang, et al. Genetic insights into the dissolution of dioecy in diploid persimmon Diospyros oleifera Cheng. BMC plant biology. 2023. 23. 1. 606-606
Akane Kusumi, Soichiro Nishiyama, Ryutaro Tao. Three-dimensional fruit growth analysis clarifies developmental mechanisms underlying complex shape diversity in persimmon fruit. Journal of experimental botany. 2023
Soichiro Nishiyama, Kengo Sato, Ryutaro Tao. Integer programming for selecting set of informative markers in paternity inference. BMC bioinformatics. 2022. 23. 1. 265-265
A. Kusumi, Y. Osako, R. Nakano, S. Nishiyama, R. Tao. Phenotypic evaluation of shape diversity in persimmon fruit using two- and three-dimensional imaging. Acta Horticulturae. 2022. 1338. 263-268
Y. Fujiwara, S. Nishiyama, N. Onoue, R. Matsuzaki, K. Yonemori, R. Tao. Candidate gene analysis for ASTRINGENCY controlling fruit astringency in Diospyros kaki based on mRNA- and small RNA-sequencing analyses. Acta Horticulturae. 2022. 1338. 269-276

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MISC (26)：

長坂京香, 西村和紗, 元木航, 山形啓悟, 西山総一郎, 山根久代, 田尾龍太郎, 中野龍平, 中崎鉄也. Investigation of the mode of inheritance with a high-density linkage map in tetraploid blueberry. 園芸学研究別冊. 2023. 22. 1
藤原陽介, 西山総一郎, 尾上典之, 米森敬三, 田尾龍太郎. Association between tannin cell development and astringency in PCNA cultivars. 園芸学研究別冊. 2022. 21. 2
久住あかね, 西山総一郎, 田尾龍太郎. 3D-scanner aided quantification of changes in geometric parameters of fruit shape during persimmon fruit development. 園芸学研究別冊. 2022. 21. 1
西山総一郎, 田尾龍太郎, 米森敬三. Three-dimensional imaging of persimmon tannin cells by electron microscopy and machine learning. 園芸学研究別冊. 2022. 21. 1
平岩尚樹, 山根久代, 西山総一郎, 田尾龍太郎. The relationship between preference and sensory attributes of blueberry fruit. 園芸学研究別冊. 2022. 21. 1

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Lectures and oral presentations (11)：

倍数性果樹のゲノム特性-カキとブルーベリーの育種努力の歴史と展望-
(「高次倍数体をどうにかする会」2021冬 2021)
Physiological and genetic characterization of ‘Totsutanenashi’, a nonaploid persimmon mutant bearing extremely small size fruit
(7th International Symposium on Persimmon 2021)
DNA sequence diversity of the astringency-controlling locus in Diospyros kaki
(7th International Symposium on Persimmon 2021)
高次倍数体のSNP検出
(園芸作物バイオインフォマティクス入門3 2021)
Characterization of population structure and genetic variation of chilling requirement in southern highbush blueberry
(XII International Vaccinium Symposium 2021)

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Education (3)：

Professional career (1)：

Work history (3)：

2019/05 - 現在 Kyoto University Graduate School of Agriculture Assistant Professor
2018/04 - 2019/04 Kyoto University Graduate School of Agriculture Postdoc
2016/04 - 2018/03 日本学術振興会特別研究員DC2

Association Membership(s) (3)：

THE JAPANESE SOCIETY FOR HORTICULTURAL SCIENCE , Japanese Society of Breeding , International Society for Horticultural Science

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