Rchr
J-GLOBAL ID：201801017332980287   Update date: Feb. 01, 2024

Yuki Masahiro

Yuki Masahiro
Affiliation and department：
特定国立研究開発法人理化学研究所 BRC-JCM

About 特定国立研究開発法人理化学研究所 BRC-JCM


Job title： 開発研究員
Research field  (3)： Molecular biology ,  Genomics ,  Applied microbiology
Research keywords  (4)： シングルセルゲノム解析 ,  共生 ,  腸内細菌 ,  シロアリ
Research theme for competitive and other funds  (4)：
  • 2021 - 2024 Interaction between organisms in yet-uncultured bacterial community.
  • 2020 - 2021 難培養微生物の培養を目指した新規共培養法の構築
  • 2014 - 2016 Single-cell genomics and genome editing of unculturable protist
  • 2014 - 2016 原生生物の細胞表面に共生するTreponema属細菌のシングルセルゲノム解析
Papers (56)：
  • Kazuki Takahashi, Hirokazu Kuwahara, Yutaro Horikawa, Kazuki Izawa, Daiki Kato, Tatsuya Inagaki, Masahiro Yuki, Moriya Ohkuma, Yuichi Hongoh. Emergence of putative energy parasites within Clostridia revealed by genome analysis of a novel endosymbiotic clade. The ISME Journal. 2023. 17. 11. 1895-1906
  • Maho Tokuda, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Haruo Suzuki, Masaki Shintani. Transconjugant range of PromA plasmids in microbial communities is predicted by sequence similarity with the bacterial host chromosome. Microbial genomics. 2023. 9. 6
  • Hiroyoshi Aoki, Yuki Masahiro, Michiru Shimizu, Yuichi Hongoh, Moriya Ohkuma, Yutaka Yamagata. Agarose gel microcapsules enable easy-to-prepare, picolitre-scale, single-cell genomics, yielding high-coverage genome sequences. Scientific Reports. 2022. 12. 1
  • Shingo Kato, Ayaka Ogasawara, Takashi Itoh, Hiroyuki D. Sakai, Michiru Shimizu, Masahiro Yuki, Masanori Kaneko, Tomonori Takashina, Moriya Ohkuma. Nanobdella aerobiophila gen. nov., sp. nov., a thermoacidophilic, obligate ectosymbiotic archaeon, and proposal of Nanobdellaceae fam. nov., Nanobdellales ord. nov. and Nanobdellia class. nov. International Journal of Systematic and Evolutionary Microbiology. 2022. 72. 8
  • Hiroyuki D Sakai, Naswandi Nur, Shingo Kato, Masahiro Yuki, Michiru Shimizu, Takashi Itoh, Moriya Ohkuma, Antonius Suwanto, Norio Kurosawa. Insight into the symbiotic lifestyle of DPANN archaea revealed by cultivation and genome analyses. Proceedings of the National Academy of Sciences of the United States of America. 2022. 119. 3
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MISC (43)：
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Patents (3)：
Books (2)：
  • 実験医学別冊 腸内細菌叢 健康と疾患を制御するエコシステム
    羊土社 2019
  • 難培養微生物研究の最新技術III
    シーエムシー出版 2015
Lectures and oral presentations  (5)：
  • Single-cell genome sequencing of symbiotic bacteria
    (Workshop on “Insights from industry on utilization of microbes and their genome analysis” 2019)
  • 難培養微生物のシングルセルゲノム解析
    (第52回日本原生生物学会大会 2019)
  • シロアリ腸内原生生物と細胞内・表面共生細菌間の相互作用
    (日本微生物生態学会 第33回大会 2019)
  • Comparative genome analysis of two endosymbiotic Treponema species of cellulolytic protists in the termite gut
    (日本微生物生態学会 第32回大会 2018)
  • シングルセルゲノム解析によるシロアリ腸内原生生物と細胞内・表面共生細菌の共生関係の解明
    (第1回日本共生生物学会大会 2017)
Education (1)：
  • 2009 - Yokohama City University Graduate
Association Membership(s) (4)：
SOCIETY OF EVOLUTIONARY STUDIES, JAPAN ,  JAPAN SOCIETY FOR BIOSCIENCE, BIOTECHNOLOGY, AND AGROCHEMISTRY ,  THE JAPANESE SOCIETY OF MICROBIAL ECOLOGY ,  日本微生物資源学会
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