Taniguchi Yuichi

タニグチユウイチ | Taniguchi Yuichi

Affiliation and department：
Job title： Professor
Other affiliations (2)：

Kyoto University Graduate School of Biostudies Professor
Osaka University Graduate School of Frontier Biosciences Adjunct Professor

Research keywords (11)： Biophysics , Systems Biology , Genome , Super-computing , Microscopy , Molecular Dynamics Simulation , Machine Learning , Single Molecule Biology / Single Cell Biology , Lithography , Next Generation Sequencing , Proteome

Research theme for competitive and other funds (11)：

2023 - 2029 Development of higher order molecular genome structure analysis technology based on physics and information theory
2021 - 2026 Development of a new field of structural biology for the genome
2020 - 2025 Modality of nucleosome dynamics
2020 - 2025 Biophysics of higher-order molecular genome structure
2020 - 2023 1分子スケール蛍光分析化学の創出

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Papers (26)：

Sooyeon Kim, Latiefa Kamarulzaman, Yuichi Taniguchi. Recent methodological advances towards single-cell proteomics. Proceedings of the Japan Academy, Series B. 2023. 99. 8. 306-327
Mehrdad Oveisi, Manu Shukla, Nogayhan Seymen, Masae Ohno, Yuichi Taniguchi, Sunil Nahata, Remco Loos, Ghulam J Mufti, Robin C Allshire, Stefan Dimitrov, et al. iNucs: inter-nucleosome interactions. Bioinformatics. 2021. 37. 23. 4562-4563
Masae Ohno, Tadashi Ando, David Priest, Yuichi Taniguchi. Hi-CO: 3D genome structure analysis with nucleosome resolution. Nature Protocols. 2021. 16. 3439-3469
Soya Shinkai, Masaki Nakagawa, Takeshi Sugawara, Yuichi Togashi, Hiroshi Ochiai, Ryuichiro Nakato, Yuichi Taniguchi, Shuichi Onami. PHi-C: deciphering Hi-C data into polymer dynamics. NAR Genomics and Bioinformatics. 2020. 2. 2. lqaa020
Vipin Kumar, Simon Leclerc, Yuichi Taniguchi. BHi-Cect: a top-down algorithm for identifying the multi-scale hierarchical structure of chromosomes. Nucleic Acids Research. 2020. 48. 5. e26-e26

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MISC (2)：

谷口雄一. 1分子・1細胞網羅的遺伝子発現解析. Protein Community. 2011. 7. 16-19
Toshio Yanagida, Jim Kozuka, Takuya Okada, Yuichi Taniguchi, Mitsuhiro Iwaki, Yoshiharu Ishii. Chapter 1 Single molecule nano-bioscience: Fluctuations and adaptive biological molecular machines. Handai Nanophotonics. 2007. 3. 3-21

Patents (4)：

顕微鏡、焦準器具、及び試料台保持器具
Methods and systems for single-molecule RNA expression profiling
データ解析装置、プログラム及び記録媒体、並びにデータ解析方法
分光分析装置、分光分析方法、プログラム、記録媒体及び顕微鏡

Books (14)：

Single-Molecule Science
Cambridge University Press 2022 ISBN:9781108525909
細胞 2020年11月号単一細胞レベル解析の新技術
ニュー・サイエンス社 2020
Minorities and small numbers from molecules to organisms in biology : toward a new understanding of biological phenomena
Springer 2018 ISBN:9789811320828
定量生物学 : 生命現象を定量的に理解するために
化学同人 2018 ISBN:9784759817300
シングルセル解析プロトコール : わかる!使える!1細胞特有の実験のコツから最新の応用まで
羊土社 2017 ISBN:9784758122344

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Lectures and oral presentations (83)：

Nucleosome-level 3D organization of the genome
(16th International Symposium on Nanomedicine (ISNM2023) 2023)
ヌクレオソーム分解能でのゲノムの3次元構造解析
(第2回Philosophy研究会 2023)
分子解像度での生命理解に向けて
(第7回IPRフロンティアセミナー 2023)
ゲノムDNAの3次元構造解析技術の開発
(第15回中谷賞授賞式・受賞講演 2023)
3次元1分子蛍光イメージング技術の開発
(第5回晝馬輝夫光科学賞授賞式・受賞講演 2023)

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Education (3)：

2003 - 2006 Osaka University Graduate School of Engineering Science Department of Mechanical Science and Bioengineering
2001 - 2003 Osaka University Graduate School of Engineering Science Department of Systems and Human Science
1997 - 2001 Osaka University School of Engineering Science Department of Systems Science

Work history (12)：

2020/10 - 現在 Osaka University Graduate School of Frontier Biosciences Adjunct Professor
2020/10 - 現在 Kyoto University Graduate School of Biostudies Professor
2020/10 - 現在 Kyoto University Institute for Advanced Study Professor
2023/10 - 2029/03 Japan Science and Technology Agency (JST) Core Research for Evolutionary Science and Technology (CREST) Principal Investigator
2021/04 - 2026/03 Suntory Rising Stars Encouragement Program in Life Sciences (SunRiSE) SunRiSE Fellow

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Committee career (2)：

2016/04 - 現在 - -
2024/04 - 2026/03 日本生物物理学会会誌編集委員

Awards (10)：

2024 - 56th Ichimura Foundation Incentive Award
2023 - 15th Nakatani Foundation Incentive Award
2023 - 5th Teruo Hiruma Optical Science Award
2022 - FY2022 The Minister of Education, Culture, Sports, Science and Technology (MEXT) Award in the Field of Science and Technology
2022 - 9th Kyoto STEM Cells, Smart Materials & Innovation (SMI) Nakatsuji Award

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Association Membership(s) (1)：

The Biophysical Society of Japan

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