Rchr
J-GLOBAL ID:202201009261609043   Update date: Dec. 03, 2024

Miyazaki Yusuke

ミヤザキ ユウスケ | Miyazaki Yusuke
Research field  (1): Bio-, chemical, and soft-matter physics
Research keywords  (2): Computational Chemistry ,  Molecular Simulation
Research theme for competitive and other funds  (2):
  • 2024 - 2026 安全な抗菌ペプチドのin silico分子設計へ資する分子動力学法と機械学習による研究
  • 2021 - 2025 Molecular Dynamics of Intracellular Transport of Lipid Nanoparticles: Molecular mechanism of endosomal escape of nucleic acids
Papers (16):
  • Kunanon Chattrairat, Akira Yokoi, Min Zhang, Mikiko Iida, Kosuke Yoshida, Masami Kitagawa, Ayuka Niwa, Masatoshi Maeki, Takeshi Hasegawa, Takeshi Yokoyama, et al. Discrimination of extracellular miRNA sources for the identification of tumor-related functions based on nanowire thermofluidics. Device. 2024. 2. 100363
  • Masatoshi Maeki, Niko Kimura, Yuto Okada, Kazuki Shimizu, Kana Shibata, Yusuke Miyazaki, Akihiko Ishida, Kento Yonezawa, Nobutaka Shimizu, Wataru Shinoda, et al. Understanding the effects of ethanol on the liposome bilayer structure using microfluidic-based time-resolved small-angle X-ray scattering and molecular dynamics simulations. Nanoscale Advances. 2024. 6. 8. 2166-2176
  • Wenting Huo, Koji Miki, Huiying Mu, Takashi Osawa, Harumi Yamaguma, Yuuya Kasahara, Satoshi Obika, Yoshimasa Kawaguchi, Hisaaki Hirose, Shiroh Futaki, et al. Light-controllable cell-membrane disturbance for intracellular delivery. Journal of Materials Chemistry B. 2024. 12. 17. 4138-4147
  • Yusuke Miyazaki, Wataru Shinoda. pSPICA Force Field Extended for Proteins and Peptides. Journal of Chemical Information and Modeling. 2023. 64. 2. 532-542
  • Teppei Yamada, Yusuke Miyazaki, Shogo Harada, Ashutosh Kumar, Stefano Vanni, Wataru Shinoda. Improved Protein Model in SPICA Force Field. Journal of Chemical Theory and Computation. 2023. 19. 23. 8967-8977
more...
MISC (1):
  • 宮崎 裕介. 分子動力学法を用いた抗菌ペプチドによる膜細孔形成過程の研究. アンサンブル. 2022. 24. 1
Lectures and oral presentations  (3):
  • Coarse-grained molecular dynamics study on lipid nanoparticles
    (The 6th International Conference on Molecular Simulation 2023)
  • Coarse-grained molecular dynamics simulations of antimicrobial peptides on lipid membranes
    (CECAM workshop "Macromolecular complexes: from ab initio and integrative modelling to functional dynamics" 2023)
  • Coarse-Grained Molecular Dynamics Study of the Action of Antimicrobial Peptides on Lipid Membranes
    (The 9th International Discussion Meeting on Relaxations in Complex Systems 2023)
Education (1):
  • - 2020 Nagoya University Graduate School of Engineering
Professional career (1):
  • Doctor of Philosophy in Engineering (Nagoya University)
Work history (2):
  • 2022/01 - 2024/07 Okayama University
  • 2020/04 - 2021/12 Asahi Kasei Corporation
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