Rchr
J-GLOBAL ID：202301013360040421
Update date: Oct. 26, 2024
Fukasawa Yoshinori
フカサワ ヨシノリ | Fukasawa Yoshinori
Affiliation and department：
Job title：
Associate Professor
Research field (2)：
Systems genomics
, Biological, health, and medical informatics
Research keywords (4)：
Protein structure analysis
, Omics analysis
, Genome science
, Bioinformatics
Research theme for competitive and other funds (2)：
- 2023 - 2025 多倍体ゲノムのためのハプロタイプを考慮した構造変異解析手法の開発
- 2012 - 2015 ミトコンドリア内膜におけるタンパク質の制御機構に関する生命情報学的解析
Papers (19)：
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Géraldine C. Genard, Luca Tirinato, Francesca Pagliari, Jessica Da Silva, Alessandro Giammona, Fatema Alquraish, Maria Parra Reyes, Marie Bordas, Maria Grazia Marafioti, Simone Di Franco, et al. Lipid droplets and small extracellular vesicles: More than two independent entities. Journal of Extracellular Biology. 2024. 3. 9
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Yoshinori Fukasawa, Patrick Driguez, Salim Bougouffa, Karen Carty, Alexander Putra, Ming-Sin Cheung, Luca Ermini. Plasticity of repetitive sequences demonstrated by the complete mitochondrial genome of Eucalyptus camaldulensis. Frontiers in plant science. 2024. 15. 1339594-1339594
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Yoshinori Fukasawa, Kenichiro Imai, Paul Horton. Prediction of mitochondrial targeting signals and their cleavage sites. Methods in Enzymology. 2024. 161-192
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Lama AlAbdi, Hanan E Shamseldin, Ebtissal Khouj, Rana Helaby, Bayan Aljamal, Mashael Alqahtani, Aisha Almulhim, Halima Hamid, Mais O Hashem, Firdous Abdulwahab, et al. Beyond the exome: utility of long-read whole genome sequencing in exome-negative autosomal recessive diseases. Genome medicine. 2023. 15. 1. 114-114
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Patrick Driguez, Salim Bougouffa, Karen Carty, Alexander Putra, Kamel Jabbari, Muppala Reddy, Richard Soppe, Ming Sin Cheung, Yoshinori Fukasawa, Luca Ermini. LeafGo: Leaf to Genome, a quick workflow to produce high-quality de novo plant genomes using long-read sequencing technology. GENOME BIOLOGY. 2021. 22. 1
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MISC (1)：
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Géraldine Genard, Luca Tirinato, Francesca Pagliari, Jessica Da Silva, alessandro giammona, Fatema Alquraish, Marie Bordas, Maria Grazia Marafioti, simone di franco, Jeannette Jansen, et al. Lipid Droplets Fuel Small Extracellular Vesicle Biogenesis. 2022
Lectures and oral presentations (3)：
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Solutions and new challenges of bioinformatics in long-accurate read era.
(GIW/ISCB-Asia 2022 2022)
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Reference-free data quality control using LongQC
(Nanopore Community Meeting 2020 2020)
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Accurate prediction of mitochondrial presequence and their cleavage site with MitoFates identifies hundreds of novel human mitochondrial protein candidates
(ISMB 2014 2014)
Education (3)：
- 2009 - 2014 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology
- 2004 - 2009 Tohoku University Faculty of Agriculture Department of Applied Bio-Sciences
- 2007 - 2008 University of California, Davis College of Biological Sciences Plant biology
Professional career (1)：
- Doctor of Philosophy (The University of Tokyo)
Work history (6)：
- 2023/04 - 現在 Utsunomiya University Center for Bioscience Reseach & Education Associate Professor
- 2018/07 - 2023/03 King Abdullah University of Science and Technology Core Labs Team lead
- 2017/05 - 2018/07 King Abdullah University of Science and Technology Core Labs Staff scientist
- 2015/04 - 2017/03 National Institute of Advanced Industrial Science and Technology Artificial Intelligence Research Center AIST Postdoctoral Researcher
- 2014/10 - 2015/03 Japan Society for the Promotion of Science Research Fellowships for Young Scientists (PD)
- 2012/04 - 2014/09 Japan Society for the Promotion of Science Research Fellowships for Young Scientists (DC1)
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Committee career (2)：
- 2023/09 - 2024/09 日本植物学会 第88回大会実行委員会
- 2012 - 2013 Asian Young Researchers Conference on Computational and Omics Biology (AYRCOB) Organizing committee
Awards (6)：
Association Membership(s) (2)：
日本分子生物学会
, The Botanical Society of Japan
