Rchr
J-GLOBAL ID：202401008915093643
Update date: Jul. 25, 2024
Sakamoto Yoshitaka
サカモト ヨシタカ | Sakamoto Yoshitaka
Affiliation and department：
Job title：
Staff scientist
Research keywords (2)：
バイオインフォマティクス
, がんゲノム
Research theme for competitive and other funds (2)：
- 2024 - 2027 個別化参照ゲノムを用いた新規がんゲノム構造変異解析手法の開発
- 2021 - 2023 ロングリードによる肺がんゲノム構造変異とDNAメチル化状態の統合解明
Papers (12)：
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Yasuhiko Haga, Yoshitaka Sakamoto, Keiko Kajiya, Hitomi Kawai, Miho Oka, Noriko Motoi, Masayuki Shirasawa, Masaya Yotsukura, Shun-Ichi Watanabe, Miyuki Arai, et al. Whole-genome sequencing reveals the molecular implications of the stepwise progression of lung adenocarcinoma. Nature communications. 2023. 14. 1. 8375-8375
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Yasuhiko Haga, Yoshitaka Sakamoto, Miyuki Arai, Yutaka Suzuki, Ayako Suzuki. Long-Read Whole-Genome Sequencing Using a Nanopore Sequencer and Detection of Structural Variants in Cancer Genomes. Methods in molecular biology (Clifton, N.J.). 2023. 2632. 177-189
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Yoshitaka Sakamoto, Shuhei Miyake, Miho Oka, Akinori Kanai, Yosuke Kawai, Satoi Nagasawa, Yuichi Shiraishi, Katsushi Tokunaga, Takashi Kohno, Masahide Seki, et al. Phasing analysis of lung cancer genomes using a long read sequencer. Nature communications. 2022. 13. 1. 3464-3464
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Suzuko Zaha, Yoshitaka Sakamoto, Satoi Nagasawa, Sumio Sugano, Ayako Suzuki, Yutaka Suzuki, Masahide Seki. Whole-genome Methylation Analysis of APOBEC Enzyme-converted DNA (~5 kb) by Nanopore Sequencing. Bio-protocol. 2022. 12. 5. e4345
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Yoshitaka Sakamoto, Suzuko Zaha, Satoi Nagasawa, Shuhei Miyake, Yasuyuki Kojima, Ayako Suzuki, Yutaka Suzuki, Masahide Seki. Long-read whole-genome methylation patterning using enzymatic base conversion and nanopore sequencing. Nucleic acids research. 2021. 49. 14. e81
ｍore...
Lectures and oral presentations (2)：
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ナノポアシークエンサーを用いたDNA付加体検出手法の開発
(2024年度(令和6年度)日本環境変異原ゲノム学会公開シンポジウム 2024)
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Personalized matched control reference-based approach can detect structural variants accurately in cancer genomes
(2023)
Education (4)：
- 2020 - 2023 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology and Medical Sciences
- 2018 - 2020 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology and Medical Sciences
- 2016 - 2018 The University of Tokyo Faculty of Science Undergraduate Program for Bioinformatics and Systems Biology
- 2014 - 2016 The University of Tokyo College of Arts and Sciences
Professional career (1)：
Work history (2)：
- 2023/04 - 現在 National Cancer Center Research Institute Division of Genome Analysis Platform Development Staff scientist
- 2022/04 - 2023/03 Japan Society for the Promotion of Science
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