Rchr
J-GLOBAL ID:200901002657196119   Update date: Mar. 25, 2024

Abe Akira

アベ アキラ | Abe Akira
Affiliation and department:
Job title: 主席研究員
Homepage URL  (1): https://genome.ibrc.or.jp
Research field  (1): Plant genetics and breeding
Research keywords  (5): Rice ,  Millet ,  Genomics ,  Plant Breeding ,  NGS
Research theme for competitive and other funds  (10):
  • 2023 - 2026 Identification of candidate genes for quantitative traits and evaluation of genetic resource diversity of a novel model plant, Setaria, using NGS
  • 2023 - 2026 イネNAM集団を用いた高精度ゲノミックデザインモデルの構築と有用ハプロタイプの解明
  • 2020 - 2025 Rice NLR genes, their function and evolution
  • 2021 - 2024 Mathematical Modeling to Evaluate Environmental Responsiveness of multiple QTL for flowering time Using Dual-NAM Population
  • 2020 - 2023 Analsyes of diversity of foxtail millet landraces and experimental strains using genome information for conservation of genetic resources
Show all
Papers (46):
  • Toshiyuki Sakai, Tomoaki Fujioka, Toyokazu Uemura, Shinichi Saito, Ryohei Terauchi, Akira Abe. Whole-genome analysis of recombinant inbred rice lines reveals a quantitative trait locus on chromosome 3 with genotype-by-environment interaction effects. G3 (Bethesda, Md.). 2023. 13. 6
  • Basavaraj Kovi, Toshiyuki Sakai, Akira Abe, Eiko Kanzaki, Ryohei Terauchi, Motoki Shimizu. Isolation of Pikps, an allele of Pik, from the aus rice cultivar Shoni. Genes & genetic systems. 2023
  • Satoshi Natsume, Kaori Oikawa, Chihiro Nomura, Kazue Ito, Hiroe Utsushi, Motoki Shimizu, Ryohei Terauchi, Akira Abe. V-primer: software for the efficient design of genome-wide InDel and SNP markers from multi-sample variant call format (VCF) genotyping data. Breeding Science. 2023. 73. 4. 415-420
  • Yu Sugihara, Yoshiko Abe, Hiroki Takagi, Akira Abe, Motoki Shimizu, Kazue Ito, Eiko Kanzaki, Kaori Oikawa, Jiorgos Kourelis, Thorsten Langner, et al. Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector. PLoS biology. 2023. 21. 1. e3001945
  • Tomoyuki Takase, Motoki Shimizu, Shigekazu Takahashi, Keiichirou Nemoto, Fumina Goto, Chiharu Yoshida, Akira Abe, Masahiro Nishihara. De Novo Transcriptome Analysis Reveals Flowering-Related Genes That Potentially Contribute to Flowering-Time Control in the Japanese Cultivated Gentian Gentiana triflora. International journal of molecular sciences. 2022. 23. 19
more...
MISC (32):
  • 清水元樹, 足助聡一郎, 阿部陽, 土佐幸雄, 寺内良平, 寺内良平. Isolation of factors determining host specificity between wheat blast isolate and rice. 育種学研究. 2023. 25
  • 加藤大明, 根本圭一郎, 清水元樹, 阿部陽, 浅井秀太, 石濱伸明, 松岡聖二, 大門高明, 小鹿一, 川北一人, et al. Involvement of apoplastic ceramidase in plant immunity. 日本植物病理学会報. 2023. 89. 1
  • 吉津祐貴, 高草木雅人, 高草木雅人, 菅広和, 菅広和, 大里達朗, 阿部陽, 清水元樹, 伊藤和江, 寺内良平, et al. Breeding and properties of glutinous foxtail millet cultivar with short culm and high yield, ‘Awa Iwatemochi 11’. 育種学研究. 2023. 25
  • 高橋重一, 清水元樹, 高瀬智敬, 根本圭一郎, 阿部陽, 後藤史奈, 吉田千春, 平渕亜紀子, 小田島雅, 小澤傑, et al. Development of SNP-molecular markers from RNA sequencing in Japanese cultivated gentian. 育種学研究. 2022. 24
  • 藤岡智明, 高橋加菜子, 小舘琢磨, 阿部陽. Comparative Analysis of traits associated lodging resistance in Pyramid Lines of Rice Cultivar “Hitomebore” Having QTLs for Agronomic Traits. 日本作物学会講演会要旨集. 2022. 253rd
more...
Books (3):
  • Rice Genomics, Genetics and Breeding
    Springer 2018
  • 次世代シークエンス解析スタンダード
    羊土社 2014
  • The handbook of plant mutation screening : mining of natural and induced alleles
    Wiley-VCH 2010 ISBN:3527326049
Lectures and oral presentations  (21):
  • V-primer: A new application for designing large-scale primers from NGS data
    (育種学研究 2022)
  • Identification of a novel NRL2-interacting protein involved in leaf morphology in rice
    (育種学研究 2022)
  • Identification of blast resistance QTLs in rice cultivar “Jaguary“
    (育種学研究 2020)
  • Gene-environment interaction study on agronomic traits using rice recombinant inbred lines
    (日本作物学会講演会要旨集 2020)
  • MutMapおよびQTL-seqの新規パイプライン構築と高速化
    (育種学研究 2019)
more...
Professional career (1):
  • 博士(農学) (岩手大学大学院)
Work history (1):
  • 2020/04 - 現在 Iwate Biotechnology Research Center
Awards (2):
  • 2019/03 - 日本育種学会 日本育種学会賞 全ゲノム情報をもちいた突然変異遺伝子およびQTL同定法の開発とその活用
  • 日本作物学会東北支部会 学術賞
Association Membership(s) (3):
MILLET SOCIETY OF JAPAN ,  CROP SCIENCE SOCIETY OF JAPAN ,  JAPANESE SOCIETY OF BREEDING
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