Hongoh Yuichi

ホンゴウユウイチ | Hongoh Yuichi

Affiliation and department：
Job title： Professor
Other affiliations (1)：

RIKEN Japan Collection of Microorganisms (JCM), Bioresource center (BRC) Guest Researcher

Homepage URL (1)： http://www.hongoh.bio.titech.ac.jp/

Research field (5)： Evolutionary biology , Molecular biology , Biodiversity and systematics , Ecology and environmental science , Genomics

Research keywords (12)：微生物生態 , 分子進化 , Microbiology , Entomology , Symbiology , Molecular Ecology , Environmental Genomics , 難培養性微生物 , 昆虫 , 共生 , 環境ゲノム , 分子生態学

Research theme for competitive and other funds (20)：

2020 - 2023 未培養原生生物1細胞ゲノム解析系の確立とシロアリ腸内木質分解性原生生物の機能解明
2020 - 2022 異種細菌種間付着共生系の実態解明と生物進化へのインパクトの検証
2017 - 2022 An impact of evolution of the intestinal symbioses to the host insects:interdisciplinary approaches with micro-metabolomic and genomic analyses
2018 - 2021 Genome analysis of ancient samples preserved in Antarctica
2017 - 2019 Posibilty of sympatric speciation of protists by cellular symbiosis

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Papers (87)：

Masayuki Kaneko, Tatsuki Omori, Katsura Igai, Takako Mabuchi, Miho Sakai-Tazawa, Arisa Nishihara, Kumiko Kihara, Tsuyoshi Yoshimura, Moriya Ohkuma, Yuichi Hongoh. Facultative endosymbiosis between cellulolytic protists and methanogenic archaea in the gut of the Formosan termite Coptotermes formosanus. ISME Communications. 2024. 4. 1. ycae09
Tatsuya Inagaki, Katsura Igai, Kazuki Takahashi, Yuichi Hongoh. Transmission dynamics of symbiotic protist communities in the termite gut: association with host adult eclosion and dispersal. Royal Society Open Science. 2024. 11. 5. 231527
Kazuki Takahashi, Hirokazu Kuwahara, Yutaro Horikawa, Kazuki Izawa, Daiki Kato, Tatsuya Inagaki, Masahiro Yuki, Moriya Ohkuma, Yuichi Hongoh. Emergence of putative energy parasites within Clostridia revealed by genome analysis of a novel endosymbiotic clade. The ISME Journal. 2023. 17. 11. 1895-1906
Jaclyn Thompson, Casey Barr, Lydia Babcock-Adams, Lina Bird, Eugenio La Cava, Arkadiy Garber, Yuichi Hongoh, Mark Liu, Kenneth H. Nealson, Akihiro Okamoto, et al. Insights into the physiological and genomic characterization of three bacterial isolates from a highly alkaline, terrestrial serpentinizing system. Frontiers in Microbiology. 2023. 14. e1179857
Hiroyoshi Aoki, Yuki Masahiro, Michiru Shimizu, Yuichi Hongoh, Moriya Ohkuma, Yutaka Yamagata. Agarose gel microcapsules enable easy-to-prepare, picolitre-scale, single-cell genomics, yielding high-coverage genome sequences. Scientific Reports. 2022. 12. 1

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MISC (68)：

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Lectures and oral presentations (18)：

Genomics of uncultivable bacteria deciphers multilayered symbiotic system in the termite gut
(2018 World Life Science Conference 2018)
Multi-layered symbiotic system in the termite gut"
(The 46th Naito Conference 2018)
Genomics of uncultivable bacteria deciphers multilayered symbiotic system in the termite gut
(Max Planck Institute(Marburg) Workshop: International Workshop on Insect Gut Microbiology 2018)
Single-cell genomics deciphers the termite gut ecosystem
(第91回日本細菌学会総会国際シンポジウム:Frontiers in Bacterial Genomics 2018)
Single cell genomics deciphers the complex symbiotic system in the termite gut microbiota
(The 11th International Workshop on Advanced Genomics (IWAG11) 2015)

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Education (5)：

1996 - 2000 The University of Tokyo Graduate School of Science Department of Biological Sciences
- 2000 University of Tokyo Graduate School of Sciences Depratment of Biological Sciences
1993 - 1996 The University of Tokyo Graduate School of Science Department of Biological Sciences
1989 - 1993 Tokyo University Faculty of Science
1985 - 1988 私立武蔵高校

Professional career (1)：

Doctor of Sciences (Graduate School of Sciences, University of Tokyo)

Work history (6)：

2014 - 現在 Tokyo Institute if Technology School of Life Science and Technology Professor
2009 - 2014 Tokyo Institute of Technology Graduate School of Bioscience and Technology Associate Professor
2007 - 2009 RIKEN Research Associate
2004 - 2007 RIKEN Special Postdoctoral Fellow
2000 - 2004 JST ICORP Research Scientist

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Committee career (8)：

2024/01 - 現在日本共生生物学会理事
2022/01 - 現在日本微生物生態学会評議員
2020 - 現在日本ゲノム微生物学会評議員
2017 - 現在日本微生物生態学会 Microbes and Environments Associate Editor
2017 - 2021/09 国際微生物生態学会 The ISME Journal Editorial Board

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Awards (10)：

2009 - The young scientist award from the Society of Genome Microbiolgy, Japan
2009 - The Japan Bioscience, Biotechnology and Agrochemistry Society Award for the Encouragement of Young Scientists
2009 - 日本ゲノム微生物学会奨励賞
2009 - 日本農芸化学会奨励賞
2009 - 日本農学進歩賞

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Association Membership(s) (8)：

SOCIETY OF EVOLUTIONARY STUDIES, JAPAN , 日本共生生物学会 , International Society for Microbial Ecology , 日本応用動物昆虫学会 , 日本ゲノム微生物学会 , 日本農芸化学会 , 日本微生物生態学会 , American Society for Microbiology

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