J-GLOBAL ID:200901016862445882   Update date: Nov. 26, 2019


タカハシ タクヤ | TAKAHASHI Takuya
Affiliation and department:
Job title: Professor
Other affiliations (1):
Research field  (2): Structural biochemistry ,  Biophysics
Research keywords  (1): Structural biology, biophysics, molecular science, computer science
Papers (29):
  • Takuya Shimato, Kota Kasahara​​, Junichi Higo and Takuya Takahashi. Effects of number of parallel runs and frequency of bias-strength replacement in generalized ensemble molecular dynamics simulations. Peer J. Phys. Chem. 2019. 1:e4
  • Kota Kasahara​​, Yuki Takimoto,Ryoi Ashida, Takuya Takahashi. Effects of ion-water Lennard-Jones potentials on the hydration dynamics around a monovalent atomic ion in molecular dynamics simulations. Molecular Simulation. 2019. 45. 19. 1572-
  • Kota Kasahara​​, HirokiTerazawa, Takuya Takahashi, and Junichi Higo. Studies on Molecular Dynamics of Intrinsically Disordered Proteins and Their Fuzzy Complexes: A Mini-Review. Computational and Structural Biotechnology Journal. 2019. 17. 712-720
  • Ryosuke Iwai, Kota Kasahara​​, and Takuya Takahashi. Influence of various parameters in the replica-exchange molecular dynamics method: Number of replicas, replica-exchange frequency, and thermostat coupling time constant. Biophysics and Physicobiology. 2018. 15. 165-172
  • Naoki Ogasawara​, Kota Kasahara​​, Ryosuke Iwai, and Takuya Takahashi. Unfolding of α-helical 20-residue poly-glutamic acid analyzed by multiple runs of canonical molecular dynamics simulations. PeerJ. 2018. 6. e4769
Books (4):
  • "イオンと水", 水と生命
    永山國昭監修 共立出版 2000
  • "ライフサイエンスと保健衛生", 保健衛生と健康スポーツ科学
    篠原出版新社 2006
  • 生命科学1 生物個体から分子へ
    コロナ社 2012 ISBN:978-4-339-06742-2
  • Practical Estimation of TCR-pMHC Binding Free-Energy Based on the Dielectric Model and the Coarse-Grained Model
    InTech - Open Access Company 2012
Lectures and oral presentations  (91):
  • 金属貯蔵タンパク質フェリチンの3回軸及び4回軸でのイオン透過における静電エネルギー障壁計算
    (日本生物物理学会第40回年会 2000)
  • Calculation of solvation free energy of biomolecules : Evaluation of numerical error of continuum model
    (日本生物物理学会第43回年会 2000)
  • 2面角系における溶媒効果を取り込んだ蛋白質エネルギー極小化アルゴリズムの開発
    (日本生物物理学会第41回年会 2003)
  • 溶媒効果を取り込んだ蛋白質エネルギー極小化アルゴリズムの2面角系への拡張
    (第26回溶液化学シンポジウム 2003)
  • Development of Energy-minimization and Molecular Simulation Algorithm Considering Solvation Effects in Dihedral Angle Space
    (The 1st Pacific-Rim International Conference on Protein Science 2004)
Education (2):
  • - 1985 The University of Tokyo Faculty of Science Department of Physics
  • - 1991 The University of Tokyo "Graduate School, Division of Science"
Professional career (1):
  • Ph.D. in Science (The University of Tokyo) (The University of Tokyo)
Work history (4):
  • 1997/09/01 - 2003/03/31 nins
  • 2003/04/01 - 2008/03/31 Ritsumeikan University Graduate School of Science and Engineering Associate Professor
  • 2008/04/01 - 2010/03/31 Ritsumeikan University College of Life Sciences Associate Professor
  • 2010/04/01 - Ritsumeikan University College of Life Sciences Professor
Committee career (1):
  • 2014/01 - 2016/01 Japan Society for the Promotion of Science Grants-in-Aid forScientific Research
Association Membership(s) (2):
The Biophysical Society of Japan ,  Protein Science Society of Japan
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