Rchr
J-GLOBAL ID:200901037707199627
Update date: Nov. 05, 2024
Atomi Haruyuki
アトミ ハルユキ | Atomi Haruyuki
Affiliation and department:
Job title:
Professor,Professor
Homepage URL (1):
http://www.sbchem.kyoto-u.ac.jp/atomi-lab/en
Research field (1):
Applied biochemistry
Research keywords (6):
metabolism and physiology
, Extremophiles
, Archaea
, Genomics
, Biological Chemistry
, Applied Microbiology
Research theme for competitive and other funds (39):
- 2022 - 2025 Transportome analysis on Archaea
- 2019 - 2024 Post-Koch Ecology - The next-era microbial ecology
- 2019 - 2024 Post-Koch studies on Archaea: the third domain of life
- 2020 - 2023 Functional analysis of novel Cas protein candidates for development of new genetic engineering technology
- 2018 - 2021 Understanding how fundamental biomolecules are synthesized in primordial microbes
- 2016 - 2019 Expanding the range of genetic systems in hyperthermophilic archaea
- 2017 - 2019 Elucidating gene function by awakening microbial activity
- 2014 - 2018 Comprehensive analysis of archaeal transcriptional regulators in a hyperthermophile
- 2014 - 2017 Studies on genome integrity of archaea in the extremophilic environments
- 2014 - 2017 Molecular Mechanism of Metal Cluster Incorporation in Hydorogenase Maturation Process
- 2014 - 2017 Cold temperature adaptation of hyperthermophiles
- 2014 - 2017 Novel insights into proteins controlling chromosome structure and gene expression in Archaea
- 2011 - 2016 Enhancing and fusing archaeal metabolism: a new approach towards bioenergy production
- 2011 - 2015 Molecular Mechanism of Protein Maturation of Hydrogenase
- 2011 - 2014 How is the genome integrity of the hyperthermophiles protected and propagated?
- 2011 - 2013 Roles of cold-inducible chaperones in hyperthermophiles
- 2010 - 2012 Identification of valuable genes from a hyperthermophile by focusing attention on its transcriptional regulation network
- 2010 - 2011 Exploring the possibilities of genome recombination
- 2009 - 2011 Determining the regulons and their functions in hyperthermophiles
- 2008 - 2011 STRUCTURAL BIOLOGY ON MATURATION PROCESS OF METALLOPROTEINS
- 2008 - 2010 Principle of replication machinery for archaeal DNA replication
- 2008 - 2010 Study on homeostasis of hyperthermophiles
- 2007 - 2010 Higher-order genomic structure and subcellular organization
- 2008 - 2009 超好熱菌を宿主とした遺伝子発現系の構築
- 2007 - 2009 Studies on novel microorganisms isolated from Antarctica
- 2007 - 2008 Novel metabolic pathway discovery based on contradictions between genome data and biochemical properties
- 2006 - 2007 超好熱菌を宿主とした遺伝子発現系の構築
- 2005 - 2006 Elucidation of gene regulation systems based on genome analysis
- 2002 - 2006 Total functional genomics of the hyperthermophilic archaeon, T.kodakaraensis KOD1
- 2005 - 2005 超好熱菌を宿主とした遺伝子発現系の構築
- 2003 - 2004 Development of a system for enhancing protein thermostability in vivo using hyperthermophiles
- 2001 - 2003 Studies on non-covalent interactions between strongly conelated biomolecules
- 2000 - 2000 -10°Cでも増殖する超耐冷細菌KB700A株の解析と利用
- 1999 - 2000 Efficient carbon dioxide fixation by a Rubisco from hyperthermophilic archaea
- 1999 - 2000 Anaerobic carbon dioxide fixation by microorganisms
- 1999 - 1999 グリーストラップ浄化能をもつ岩石中から分離した微生物の解析と利用
- 1997 - 1998 原核細胞・真核細胞の双方で機能するプロモーターの発現調節機構の解析
- 1996 - 1996 原核細胞でも機能する真核細胞由来のプロモーターの発現調製機構の解析
- 1993 - 1993 真核・原核両細胞で機能するCandida酵母のICLプロモーターの基礎解析
Show all
Papers (265):
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Kaede Kachi, Takaaki Sato, Maina Nagasawa, Isaac Cann, Haruyuki Atomi. The Lreu_1276 protein from Limosilactobacillus reuteri represents a third family of dihydroneopterin triphosphate pyrophosphohydrolases in bacteria. Applied and Environmental Microbiology. 2024
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Kodai Yamaura, Naomichi Takemata, Masashi Kariya, Sonoko Ishino, Masataka Yamauchi, Shoji Takada, Yoshizumi Ishino, Haruyuki Atomi. Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA structure. 2024
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D. A. Cowan, S. V. Albers, G. Antranikian, H. Atomi, B. Averhoff, M. Basen, A. J. M. Driessen, M. Jebbar, Z. Kelman, M. Kerou, et al. Extremophiles in a changing world. Extremophiles. 2024. 28. 2
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Yuta Michimori, Yuusuke Yokooji, Haruyuki Atomi. An energy-conserving reaction in amino acid metabolism catalyzed by arginine synthetase. Proceedings of the National Academy of Sciences. 2024. 121. 16
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Yuta Michimori, Rikihisa Izaki, Yu Su, Yuto Fukuyama, Shigeru Shimamura, Karin Nishimura, Yuya Miwa, Sotaro Hamakita, Takahiro Shimosaka, Yuki Makino, et al. Removal of phosphoglycolate in hyperthermophilic archaea. Proceedings of the National Academy of Sciences. 2024. 121. 16
more...
MISC (202):
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Haruyuki Atomi. How Hyperthermophiles Thrive in the Heat. Netsu Sokutei. 2021. 48. 2. 78-84
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Discovery of a reversible TCA cycle in a thermophile through multi-omics analyses. Low Temperature Science. 2021. 79. 31-36
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友居昌慶, 加藤真悟, 伊藤隆, 平井美穂, 高木善弘, 布浦拓郎, 大熊盛也, 跡見晴幸. Isolation of microorganisms from acidic environments. 日本農芸化学会大会講演要旨集(Web). 2021. 2021
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Takuro NUNOURA, Yoshito CHIKARAISHI, Haruyuki ATOMI. 好熱性水素酸化細菌における始原的で可逆的なTCA回路. KAGAKU TO SEIBUTSU. 2018. 57. 1. 7-9
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布浦 拓郎, 力石 嘉人, 跡見 晴幸. 好熱性水素酸化細菌の代謝から 生命の起源に迫る. 現代化学 = Chemistry today. 2018. 569. 57-61
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Books (9):
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アーキア生物学
共立出版 2017
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応用微生物学
文永堂出版 2016
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Protein Engineering Handbook Volume 3
2013
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Thermophilic Microbes in Environmental and Industrial Biotechnology
Springer 2013
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Thermophiles: Biology and Technology at High Temperatures
CRC Press 2008
more...
Lectures and oral presentations (21):
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The unique metabolism of hyperthermophilic archaea
(JpGU Meeting 2021 2021)
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What the molecular biology of archaea tells us
(43rd Annual Meeting of the Molecular Biology Society of Japan 2020)
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Studies on coenzyme biosynthesis ~a new lipoyl synthase~
(MBoA7 Zoom Symposium 2020)
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The unique metabolism in Archaea
(2019 International Congress on Metabolic Sciences (ICMS2019) 2019)
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Coenzyme A Biosynthesis in Archaea
(The 14th Asian Congress on Biotechnology (ACB 2019) 2019)
more...
Works (2):
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微生物の多彩なCO<sub>2</sub>代謝に関する基礎研究
1999 - 2001
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Fundamental studies on various CO<sub>2</sub> fixation mechanisms from microorganisms
1999 - 2001
Education (3):
- 1989 - 1992 Kyoto University Graduate School, Division of Engineering
- 1987 - 1989 Kyoto University Graduate School of Engineering School of Industrial Chemistry
- 1983 - 1987 Kyoto University Faculty of Engineering School of Industrial Chemistry
Professional career (1):
- Doctor of Engineering (Kyoto University)
Work history (4):
- 2009/03 - 現在 Kyoto University Graduate School of Engineering Professor
- 1997/05 - 2009/02 Kyoto University Graduate School of Engineering Associate Professor
- 1992 - 1997 京都大学助手
- 1992 - 1997 Kyoto University, Research Assistant
Awards (1):
Association Membership(s) (8):
International Society for Extremophiles
, Japanese Society of Enzyme Engineering
, 日本環境バイオテクノロジー学会
, 日本化学会
, 日本農芸化学会
, 日本生物工学会
, 日本分子生物学会
, 日本生化学会
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