Rchr
J-GLOBAL ID：200901053233971817
Update date: Apr. 23, 2024
Shigenobu Shuji
シゲノブ シュウジ | Shigenobu Shuji
Affiliation and department：
Job title：
Professor
Other affiliations (1)：
-
University of Tsukuba
Professor (cross-appointment)
Homepage URL (2)：
https://www.shigenobulab.org/ja/
,
https://www.shigenobulab.org/en/
Research field (4)：
Entomology
, Genomics
, Evolutionary biology
, Genetics
Research keywords (6)：
昆虫
, バイオインフォマティクス
, 進化学
, ゲノム科学
, 共生
, developmental genomics
Research theme for competitive and other funds (21)：
- 2022 - 2026 シロアリの社会性進化の新理論:遺伝子重複による新たな発現調節の獲得機構の解明
- 2020 - 2024 Understand molecular mechanisms underlying endosymbiosis of aphids by using genome editing
- 2020 - 2023 ホタルの全ゲノム情報と人工飼育ホタルを用いた、昆虫の新奇形質獲得メカニズムの解明
- 2019 - 2022 Innovative method development to screen novel antimicrobial peptides by evolutionary genomics approach
- 2017 - 2022 Evolutionary theory for constrained and directional diversities
- 2017 - 2022 Evolvability and mechanism of insect-microbe association
- 2019 - 2021 Establishment and regulation of gamete integrity by symbiotic microbes
- 2017 - 2021 Symbiotic genetic network: its regulatory mechanism and the evolution
- 2015 - 2019 Molecular mechanisms of social behavior involved with maintenance of fungus comb in fungus-growing termite
- 2015 - 2018 Identification of male-killing gene in symbiotic bacteria and exploitation of the generic technology for the application
- 2015 - 2018 Identification and analysis of a novel master transcription factor for sexual organ development in lant plants
- 2013 - 2018 Next generation sociogenomics: Genomic basis underlying the sociality in termites
- 2013 - 2017 Mangrove Ecological niche
- 2013 - 2016 Molecular and evolutionary analyses of social aphids by using next generation sequencing techniques
- 2013 - 2016 Integration of biological systems through symbiosis: insights from aphid=Buchnera endosymbiosis
- 2010 - 2016 Establishment of genome analyses methods for non-model organisms
- 2013 - 2015 ゲノムアダプテーションとしての表現型可塑性:アブラムシの繁殖多型からのアプローチ
- 2013 - 2014 Identifying a factor contributing to gender difference in familial dilated cardiomyopathy
- 2010 - 2012 Genetic basis of novelty generation by symbiosis
- 2007 - 2008 Comparative systems biology of primordial germ cells
- 2001 - 2003 ショウジョウバエをモデルとした生殖細胞決定機序の解明
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Papers (216)：
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Masamitsu Sone, Junpei Yamashita, Shuji Shigenobu, Yoshifumi Yamaguchi. Slow decrease in temperature produces readthrough transcripts in mammalian hibernation. Biochemical and Biophysical Research Communications. 2024. 709. 149837-149837
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Fuku Sakamoto, Shunsuke Kanamori, Luis M. Díaz, Antonio Cádiz, Yuu Ishii, Katsushi Yamaguchi, Shuji Shigenobu, Takuro Nakayama, Takashi Makino, Masakado Kawata. Detection of evolutionary conserved and accelerated genomic regions related to adaptation to thermal niches in Anolis lizards. Ecology and Evolution. 2024. 14. 3
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Ryosuke Sato, Yoshihiko Nanasato, Naoki Takata, Soichiro Nagano, Eitaro Fukatsu, Takeshi Fujino, Katushi Yamaguchi, Yoshinari Moriguchi, Shuji Shigenobu, Yutaka Suzuki, et al. Efficient selection of a biallelic and nonchimeric gene-edited tree using Oxford Nanopore Technologies sequencing. Tree Physiology. 2023
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Miyu Sugiyama, Takane Ozawa, Kunihiro Ohta, Kensuke Okada, Teruyuki Niimi, Katsushi Yamaguchi, Shuji Shigenobu, Yasukazu Okada. Transcriptomic and functional screening of weapon formation genes implies significance of cell adhesion molecules and female-biased genes in broad-horned flour beetle. PLOS Genetics. 2023. 19. 12. e1011069-e1011069
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Kenji Toyota, Hiroshi Akashi, Momoka Ishikawa, Katsushi Yamaguchi, Shuji Shigenobu, Tomomi Sato, Anke Lange, Charles R. Tyler, Taisen Iguchi, Shinichi Miyagawa. Comparative analysis of gonadal transcriptomes between turtle and alligator identifies common molecular cues activated during the temperature-sensitive period for sex determination. Gene. 2023. 888. 147763-147763
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MISC (100)：
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角井宏行, 伊原徳子, 長谷川陽一, 釣崎恵里子, 二村典宏, 岩井淳治, 樋口有未, 藤野健, 鈴木穣, 笠原雅弘, et al. Identification of MALE STERILITY 4 gene in Japanese cedar. 育種学研究. 2022. 24
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阪口翔太, SEREGIN Alexey P, MARCHUK Elena, SEMPLE John, PAN Li, QIU Yinqiong, 瀬戸口浩彰, 牧雅之, 陶山佳久, 廣田峻, et al. 標本ゲノミクスで明らかになった広義アキノキリンソウのユーラシア拡散史. 日本植物分類学会大会研究発表要旨集. 2022. 21st (CD-ROM)
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内藤健, 若竹崇雅, 福島健児, 佐藤万仁, 平野隆, 重信秀治, 長谷部光泰, 坂井寛章. Genome sequences of 11 Vigna species. 育種学研究. 2022. 24
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佐藤一輝, 門田康弘, PAMELA Gan, 植原健人, 尾納隆大, 山口勝司, 市橋泰範, 岩堀英晶, 槇紀子, 重信秀治, et al. Functional screening for virulence effectors of the root-knot nematode that suppress plant immunity. 日本植物病理学会大会プログラム・講演要旨予稿集. 2021. 2021
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矢野大和, 矢野大和, アラム モハメッド, 林原絵美子, 柴田朋子, 福世真樹, 古田芳一, 古田芳一, 西山智明, 重信秀治, et al. ネットワークを作り配列特異性を変換するピロリ菌のDNAメチル化酵素群. 日本分子生物学会年会プログラム・要旨集(Web). 2020. 43rd
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Education (4)：
- 1998 - 2001 東京大学大学院 理学系研究科生物科学専攻 博士課程
- 1996 - 1998 東京大学大学院 理学系研究科生物科学専攻 修士課程
- 1994 - 1996 The University of Tokyo Faculty of Science Department of Biological Sciences
- 1992 - 1994 The University of Tokyo College of Arts and Sciences
Professional career (1)：
- (BLANK) (The University of Tokyo)
Work history (10)：
- 2024/04 - 現在 University of Tsukuba Center for Tsukuba Advanced Research Alliance (TARA) Professor (Cross-appointment)
- 2022/04 - 現在 National Institute for Basic Biology Trans-Scale Biology Center Professor
- 2019/04 - 2022/03 National Institute For Basic Biology, Japan Center for the Development of New Model Organisms Professor
- 2010/04 - 2019/03 National Institute for Basic Biology Core Research Facilities
- 2013/12 - 2017/08 HHMI Janelia Research Campus Visiting scientist
- 2007/04 - 2010/03 科学技術振興機構 さきがけ 専任研究員
- 2007/10 - 2009/01 Princeton Univiersity Depertment of Ecology and Evolution Visiting scientist
- 2004/03 - 2007/03 National Institute for Basic Biology
- 2001/04 - 2004/02 日本学術振興会特別研究員(PD)
- 2001 - - JSPS Research Fellow
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Committee career (1)：
- 2014 - 現在 Scientific Reports 誌 Editorial Board Member
Awards (3)：
- 2018 - 日本学術振興会 特別研究員等審査会専門委員の表彰
- 2012 - 自然科学研究機構 自然科学研究機構若手研究者賞
- 2010 - 日本進化学会 日本進化学会奨励賞
Association Membership(s) (3)：
THE ZOOLOGICAL SOCIETY OF JAPAN
, SOCIETY OF EVOLUTIONARY STUDIES, JAPAN
, 分子生物学会
