Fujiwara Susumu

フジワラススム | Fujiwara Susumu

Affiliation and department：
Job title： Professor
Homepage URL (1)： http://www.cis.kit.ac.jp/~fujiwara/index.shtml

Research field (3)： Bio-, chemical, and soft-matter physics , Polymer materials , Environmental effects of radiation

Research keywords (8)：自己組織化 , 構造形成 , コンピュータ・シミュレーション , ソフトマター , self-organization , structure formation , computer simulation , soft matter

Research theme for competitive and other funds (31)：

2021 - 2024 放射線DNA損傷を制御する酸素分圧機構の計算モデル構築
2021 - 2023 Elucidation of the third element of tritium exposure, "decay effect", by molecular simulation
2018 - 2022 Development of a stochastic DNA damage model with a molecular dynamics calculation
2015 - 2019 Clarification of the mechanisms of organic nanotubes and nanovesicles by large-scale molecular simulation
2010 - 2013 Clarification of the mechanisms of surface melting and surface freezing in n-alkane ultrathin films by large-scale molecular simulation

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Papers (147)：

K. Masumoto, S. Fujiwara, T. Mizuguchi, Y. Yonetani, N. Shikazono, K. Akamatu, H. Nakamura. Molecular dynamics simulation of fluorescent dye-labeled DNA with apurinic/apyrimidinic sites. Student Session Proceedings of the 42nd JSST Annual International Conference on Simulation Technology (JSST2023). 2023. 42-45
T. T. Hashi, S. Fujiwara, T. Mizuguchi, Y. Yonetani, N. Shikazono, K. Akamatu, H. Nakamura. Molecular dynamics simulation of gapped DNA labeled with fluorescent probes. Student Session Proceedings of the 42nd JSST Annual International Conference on Simulation Technology (JSST2023). 2023. 5-8
T. Aso, S. Fukagawa, Y. Hirano, M. Hara, S. Fujiwara. Study on effect of oxygen concentration in water radiolysis using Geant4-DNA. Conference Proceedings of the 42nd JSST Annual International Conference on Simulation Technology (JSST2023). 2023. 292-294
R. Kawanami, S. Fujiwara. Molecular dynamics study of defects on fatty acid vesicle induced by magnesium ion. Conference Proceedings of the 42nd JSST Annual International Conference on Simulation Technology (JSST2023). 2023. 337-339
S. Fujiwara, R. Kawanami, T. Mizuguchi, Y. Yonetani, T. Aso, H. Nakamura. Molecular dynamics study of OH radical-mediated DNA damage production. Conference Proceedings of the 42nd JSST Annual International Conference on Simulation Technology (JSST2023). 2023. 340-342

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MISC (140)：

中村浩章, 中村浩章, 石黒健人, 藤原進, 中田彩子, 波多野雄治, 齋藤誠紀, 安永卓生, 米谷佳晃. Molecular dynamics simulation of double strand breaks in DNA telomere structure simulating tritium beta decay. 日本物理学会講演概要集(CD-ROM). 2023. 78. 1
藤原進. シミュレーションと共同研究. 日本シミュレーション学会誌「シミュレーション」. 2022. 41. 4. 193-194
Yuji Hatano, Hiroaki Nakamura, Susumu Fujiwara, Seiki Saito, Takahiro Kenmotsu. Damages of DNA in tritiated water. The Enzymes. 2022. 51. 131-152
Susumu Fujiwara. Special Section on Recent Advances in Simulation in Science and Engineering - Post-conference proceedings for JSST2021 -. Journal of Advanced Simulation in Science and Engineering. 2022. 10. 1. I-II
中村浩章, 中村浩章, 石黒健人, 宇佐見俊介, 斎藤誠紀, 藤原進, 波多野雄治. MD Evaluation on Tritium Decay of the Tolerance of DNA. プラズマ・核融合学会年会(Web). 2022. 39th

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Books (9)：

エマルションの安定化のための新しい調製技術と評価
技術情報協会 2022 ISBN:9784861049002
Damages of DNA in tritiated water
Academic Press 2022
人物でよむ物理法則の事典
朝倉書店 2015 ISBN:9784254131161
エマルションの特性評価と新製品開発、品質管理への活用
技術情報協会 2014 ISBN:9784861045462
自己組織化と進化の論理(共訳)
筑摩書房 2008

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Lectures and oral presentations (275)：

Molecular Dynamics Simulation Study of Protocell Membrane
(AROB-ISBC-SWARM 2024 2024)
Analysis of orientation factors of gapped DNA labeled with fluorescent probes by molecular dynamics simulation
(AROB-ISBC-SWARM 2024 2024)
Molecular dynamics simulation of fluorescent dye-labeled DNA with apurinic/apyrimidinic sites
(AROB-ISBC-SWARM 2024 2024)
Molecular dynamics study of tacticity effect of polymer brushes on alanine dipeptide adsorption
(AROB-ISBC-SWARM 2024 2024)
脱塩基部位を有する損傷DNAの分子動力学シミュレーションと可視化
(2023年度核融合科学研究所一般共同研究(研究会)「先進的可視化技術とデータ科学の融合による可視化解析の研究会(VR2023)」 2023)

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Works (11)：

大規模分子シミュレーションによる直鎖アルカン薄膜の表面融解・表面固化機構の解明
2010 -
エネルギー緩和現象における普遍法則の探求
2010 -
Clarification of the mechanisms of surface melting and surface freezing in n-alkane ultrathin films by large-scale molecular simulation
2010 -
Exploration of universal laws in the energy relaxation phenomena
2010 -
ソフトマター系における構造形成とプラズマ自己組織化の比較研究
2007 - 2009

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Education (6)：

1992 - 1995 Keio University (Ph. D in physics) Faculty of Science and Technology Department of Physics
1992 - 1995 Keio University Graduate School of Science and Technology
1990 - 1992 Keio University Graduate School of Science and Technology
1990 - 1992 Keio University (M. Sc. in physics) Graduate School, Faculty of Science and Technology Department of Physics
1986 - 1990 Keio University Faculty of Science and Technology Department of Physics

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Professional career (1)：

Doctor(Science) (Keio University)

Work history (12)：

2015/04 - 現在 Kyoto Institute of Technology
2014/01 - 2015/03 Kyoto Institute of Technology Graduate School of Science and Technology
2013/10 - 2014/03 Yokohama National University Graduate School of Engineering
2007/04 - 2013/12 Kyoto Institute of Technology Graduate School of Science and Technology
2012/10 - 2013/03 Yokohama National University Graduate School of Engineering

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Committee career (9)：

2004/04 - 現在 Steering committee member of the Research Group on Computational Polymer Science in the Society of Polymer Science, Japan
2004 - 現在 - 高分子学会高分子計算機科学研究会運営委員会委員
2012/04 - 2014/03 高分子学会高分子計算機科学研究会運営委員会副委員長
2012/04 - 2014/03 Vice-chairperson of the steering committee of the Research Group on Computational Polymer Science in the Society of Polymer Science, Japan
2009/04 - 2010/03 分子シミュレーション研究会学術賞調査委員会委員

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Awards (4)：

2021/11 - JSST2021 Outstanding Presentation Award
2017/10 - 日本シミュレーション学会研究賞
2001 - Best Poster Award in "Conference on Computational Physics 2001"
1990 - 慶応工学会賞

Association Membership(s) (4)：

The Molecular Simulation Society of Japan , The Japan Society for Simulation Technology , The Society of Polymer Science, Japan , The Physical Society of Japan

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