Takeda Jun-ichi

タケダジュンイチ | Takeda Jun-ichi

Affiliation and department：
Job title： Designated assistant professor

Research field (1)： Genomics

Research keywords (1)：ゲノム科学

Research theme for competitive and other funds (1)：

2018 - 2021 Development of integrated pathogenicity prediction system using single nucleotide variants (SNVs)

Papers (29)：

Atefeh Joudaki, Jun-ichi Takeda, Akio Masuda, Rikumo Ode, Koichi Fujiwara, Kinji Ohno. FexSplice: A LightGBM-Based Model for Predicting the Splicing Effect of a Single Nucleotide Variant Affecting the First Nucleotide G of an Exon. Genes. 2023. 14. 9. 1765-1765
Takuro Toda, Mikako Ito, Jun-Ichi Takeda, Akio Masuda, Hiroyuki Mino, Nobutaka Hattori, Kaneo Mohri, Kinji Ohno. Extremely low-frequency pulses of faint magnetic field induce mitophagy to rejuvenate mitochondria. Communications biology. 2022. 5. 1. 453-453
Tomoya Hasegawa, Mikako Ito, Satoru Hasegawa, Masaki Teranishi, Koki Takeda, Shuto Negishi, Hiroshi Nishiwaki, Jun-Ichi Takeda, Tyler W LeBaron, Kinji Ohno. Molecular Hydrogen Enhances Proliferation of Cancer Cells That Exhibit Potent Mitochondrial Unfolded Protein Response. International journal of molecular sciences. 2022. 23. 5
Toshihiko Kawachi, Akio Masuda, Yoshihiro Yamashita, Jun-Ichi Takeda, Bisei Ohkawara, Mikako Ito, Kinji Ohno. Regulated splicing of large exons is linked to phase-separation of vertebrate transcription factors. The EMBO journal. 2021. 40. 22. e107485
Jun-Ichi Takeda, Sae Fukami, Akira Tamura, Akihide Shibata, Kinji Ohno. IntSplice2: Prediction of the Splicing Effects of Intronic Single-Nucleotide Variants Using LightGBM Modeling. Frontiers in genetics. 2021. 12. 701076-701076

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MISC (15)：

Jun-Ichi Takeda, Akio Masuda, Kinji Ohno. Six GU-rich (6GU(R)) FUS-binding motifs detected by normalization of CLIP-seq by Nascent-seq. GENE. 2017. 618. 618. 57-64
Jun-ichi Takeda, Chisato Yamasaki, Katsuhiko Murakami, Yoko Nagai, Miho Sera, Yuichiro Hara, Nobuo Obi, Takuya Habara, Takashi Gojobori, Tadashi Imanishi. H-InvDB in 2013: an omics study platform for human functional gene and transcript discovery. NUCLEIC ACIDS RESEARCH. 2013. 41. D1. D915-D919
武田淳一, 山崎千里, 村上勝彦, 原雄一郎, 世良実穂, 五條堀孝, 今西規. H-InvDB:ヒト遺伝子アノテーション統合データベース. 日本分子生物学会年会プログラム・要旨集(Web). 2012. 35th. 2P-0060 (WEB ONLY)
山崎千里, 武田淳一, 羽原拓哉, 世良実穂, 原雄一郎, 野田彰子, 村上勝彦, 今西規, 五條堀孝. ヒト遺伝子の統合データベースH-InvDBと関連データベース・ツール群. 日本分子生物学会年会プログラム・要旨集(Web). 2011. 34th. 2T6PII-9 (WEB ONLY)
山崎千里, 武田淳一, 羽原拓哉, 小川誠, 野田彰子, 坂手龍一, 村上勝彦, 今西規, 五條堀孝. H-InvDB:統合ヒト遺伝子アノテーションデータベース. 日本生化学会大会・日本分子生物学会年会合同大会講演要旨集. 2010. 83回・33回. 4P-1215

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Books (2)：

Lectures and oral presentations (3)：

H-InvDB(ヒト遺伝子統合データベース)と関連データベースの紹介
(RNAフロンティアミーティング2011 2011)
Comparative Analyses of Alternative Splicing Variants between Humans and Mice by Using Full-length cDNAs
(SMBE2011 2011)
ヒトとマウスの完全長cDNAを用いた選択的スプライシングの比較ゲノム解析
(BMB2007 2007)

Work history (6)：

2023/08 - 現在 Gifu University
2023/05 - 2023/07 Nagoya University
2022/04 - 2023/03 Nagoya University
2019/12 - 2022/03 Nagoya University Graduate School of Medicine Designated assistant professor
2017/07/01 - 2019/11/30 Nagoya University Graduate School of Medicine Center for Neural Disease and Cancer Division Designated assistant professor

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Association Membership(s) (2)：

日本診療情報管理学会 , 日本分子生物学会

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