Rchr
J-GLOBAL ID：200901082698871568
Update date: Aug. 26, 2024
Shimada Tomohiro
シマダ トモヒロ | Shimada Tomohiro
Affiliation and department：
Job title：
Associate Professor
Homepage URL (1)：
http://genomeregulation.planet.bindcloud.jp/
Research field (1)：
Genomics
Research keywords (10)：
transcription factor
, bacteria
, Escherichia coli
, genome
, transcription
, 転写因子
, 微生物
, 大腸菌
, ゲノム
, 転写制御
Research theme for competitive and other funds (5)：
- 2022 - 2025 Identification of the regulatory network of all functionally unknown transcription factors in Escherichia coli.
- 2019 - 2022 Identification of the whole set of the constitutive promoters in Escherichia coli
- 2016 - 2019 Identification of the whole set of constitutive promoters in Escherichia coli
- 2012 - 2015 Role of acetylation of transcription factor CRP in network of metabolic regulation
- 2009 - 2010 Analysis of Transcriptional Regulation of Genome by Pathogenicity Transcription Factor LeuO.
Papers (59)：
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Shunsuke Saito, Ikki Kobayashi, Motoki Hoshina, Emi Uenaka, Atsushi Sakurai, Sousuke Imamura, Tomohiro Shimada. Regulatory Role of GgaR (YegW) for Glycogen Accumulation in Escherichia coli K-12. Microorganisms. 2024. 12. 1
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Tomohiro Shimada, Hiroshi Ogasawara, Ikki Kobayashi, Akira Ishihama. Genomic SELEX Screening of Regulatory Targets of Transcription Factors. Methods in molecular biology (Clifton, N.J.). 2024. 2819. 77-102
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Hideji Yoshida, Tomohiro Shimada, Akira Ishihama. Metal-Responsive Transcription Factors Co-Regulate Anti-Sigma Factor (Rsd) and Ribosome Dimerization Factor Expression. International journal of molecular sciences. 2023. 24. 5
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Hiraku Takada, Kaede Kijima, Akira Ishiguro, Akira Ishihama, Tomohiro Shimada. Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism. International journal of molecular sciences. 2023. 24. 4
-
Ikki Kobayashi, Kenji Mochizuki, Jun Teramoto, Sousuke Imamura, Kazuhiro Takaya, Akira Ishihama, Tomohiro Shimada. Transcription Factor SrsR (YgfI) Is a Novel Regulator for the Stress-Response Genes in Stationary Phase in Escherichia coli K-12. International Journal of Molecular Sciences. 2022. 23. 11. 6055-6055
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MISC (26)：
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吉田秀司, 島田友裕, 牧泰史, 古池晶, 石浜明. Analysis of transcription factors that simultaneously regulate transcription and translation under various stress conditions in Escherichia coli. 日本分子生物学会年会プログラム・要旨集(Web). 2022. 45th
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吉田秀司, 島田友裕, 牧泰史, 古池晶, 上田雅美, 和田千恵子, 和田明, 石浜明. 転写・翻訳活性の同時制御に関係する転写因子. 日本RNA学会年会要旨集. 2019. 21st
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吉田秀司, 島田友裕, 牧泰史, 古池晶, 上田雅美, 和田千恵子, 和田明, 石浜明. 100Sリボソームの形成に関与する転写因子. 日本分子生物学会年会プログラム・要旨集(Web). 2018. 41st
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吉田秀司, 島田友裕, 牧泰史, 古池晶, 上田雅美, 和田千恵子, 和田明, 石浜明. ストレス下の大腸菌において転写・翻訳を同時に制御している転写因子群. 日本生化学会大会(Web). 2017. 90th
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吉田秀司, 島田友裕, 牧泰史, 古池晶, 上田雅美, 和田千惠子, 和田明, 石浜明. 抗シグマ因子Rsdと100Sリボソーム形成因子RMFの発現を制御する転写因子群. 日本分子生物学会年会プログラム・要旨集(Web). 2016. 39th
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Education (2)：
- - 2008 Hosei University Graduate School, Division of Engineering
- - 2008 Hosei University
Professional career (1)：
Work history (5)：
- 2020/04 - 現在 Meiji University School of Agriculture
- 2017/04 - 2020/03 Meiji University School of Agriculture
- 2016/04 - 2017/03 Tokyo Institute of Technology Institute of Innovative Research
- 2011/08 - 2016/03 Tokyo Institute of Technology Research Institute of Science and Technology Assistant Professor
- 2008/04 - 2011/07 Hosei University Research Center for Micro-Nano Technology, Research Center for Micro-Nano Technology
Awards (2)：
- 2020/04 - 長瀬科学技術振興財団 長瀬研究振興賞 ピルビン酸応答転写因子による炭素源代謝制御の全体像の解明
- 2008 - 日本ゲノム微生物学会 日本ゲノム微生物学会第一回研究奨励賞 Genomic SELEXによる大腸菌機能未知転写因子の調節機能の同定
Association Membership(s) (3)：
JAPAN SOCIETY FOR BIOSCIENCE, BIOTECHNOLOGY, AND AGROCHEMISTRY
, 日本分子生物学会
, 日本ゲノム微生物学会
