Rchr
J-GLOBAL ID:200901086154329960   Update date: Apr. 22, 2024

Inagaki Yuji

イナガキ ユウジ | Inagaki Yuji
Affiliation and department:
Job title: Professor
Research field  (2): Biodiversity and systematics ,  Evolutionary biology
Research theme for competitive and other funds  (18):
  • 2019 - 2023 ミトコンドリアDNAポリメラーゼの多様性と進化の全容解明
  • 2018 - 2022 海洋原生生物に共生する細菌多様性の実態解明
  • 2017 - 2020 Elucidation of evolutionary process of light adaptation in a course of loss of photosynthesis.
  • 2016 - 2019 Study on the residual green alga-derived nucleomorphs in dinoflagellates
  • 2016 - 2019 海洋バクテリアの長期炭素隔離機能に対する海洋酸性化の影響評価
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Papers (135):
  • Nakayama, Takuro, Yabuki, Akinori, Nomura, Mami, Shiba, Kogiku, Inaba, Kazuo, Inagaki, Yuji. Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates. bioRχiv. 2024
  • Harada, Ryo, Hirakawa, Yoshihisa, Yabuki, Akinori, Kim, Eunsoo, Yazaki, Euki, Kamikawa, Ryoma, Kentaro, Nakano, Eliáš, Marek, Inagaki, Yuji. Encyclopaedia of family A DNA polymerases localized in organelles: Evolutionary contribution of bacteria including the proto-mitochodrion. Molecular Biology and Evolution. 2024. 41. 2. msae014
  • Harada, Ryo, Inagaki, Yuji. Gleaning Euglenozoa-specific DNA polymerases in public single-cell transcriptome data. Protist. 2023. 174. 6. 125997
  • Kume, Keitaro, Tsubasa, Gen, Kazuki, Abe, Hiroshi, Komatsuzaki, Euki, Yazaki, Goro, Tanifuji, Ryoma, Kamikawa, Inagaki, Yuji, Hashimoto, Tetsuo. Transcriptome data sets of free-living diplomonads, Treponema sp, and Hexamita sp. MICROBIOLOGY RESOURCE ANNOUNCEMENTS. 2023. 12. 11. e0050623-e0050623
  • Harada, Ryo, Kume, Keitaro, Horie, Kazumasa, Nakayama, Takuro, Inagaki, Yuji, Amagasa, Toshiyuki. AtLASS: A scheme for end-to-end prediction of splice sites using attention-based bi-LSTM. IPSJ Transactions on Bioinformatics. 2023. 16. 20-27
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MISC (109):
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Books (4):
  • 共生微生物
    化学同人 2016 ISBN:9784759817287
  • Reference modules in Materials Science and Engineering 2016
    2016
  • ロングブランチの誘惑--分子系統解析のダークサイド
    The Japanese Journal of Phycology 2007
  • アピコンプレクサ類の退化葉緑体は緑藻起源か?
    The Japanese Journal of Phycology 2004
Lectures and oral presentations  (147):
  • Morphology, ultrastructure and phylogeny of a new species of <i>Glissandra</i> (Protista incertae sedis).
    (ICOP2017 2017)
  • 光合成関連遺伝子に着目した緑色渦鞭毛藻TGD株のヌクレオモルフゲノムの解析.
    (日本藻類学会第48回大会)
  • Transition of the gene repertoire with adaptation to parasitic lifestyle in Diplomonads: orthology analysis with related free-living species
    (The 93rd Annual Meeting of the Japanese Society of Parasitology)
  • A novel form of Rubisco that is ancestral to forms I and I’.
    (日本共生生物学会第7回大会)
  • Evolution of PCNA complex in Crenarchaota.
    (日本共生生物学会第7回大会)
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Work history (1):
  • 2016/04 - 現在 University of Tsukuba Center for Computational Sciences
Awards (3):
  • 2008/08 - 日本進化学会 日本進化学会研究奨励賞
  • 2007/04 - 文部科学省 科学技術分野の文部科学大臣表彰若手科学者賞
  • 1993/04 - 公益信託森安大学院生奨学基金
Association Membership(s) (6):
International Society of Protistologists ,  THE JAPANESE SOCIETY OF PHYCOLOGY ,  Society for Molecular Biology and Evolution ,  The Molecular Biology Society of Japan ,  SOCIETY OF EVOLUTIONARY STUDIES, JAPAN ,  International Society for Evolutionary Protistology
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