Research field (1):
Bio-, chemical, and soft-matter physics
Research keywords (1):
Softmatter Science
Research theme for competitive and other funds (18):
2023 - 2026 Evolvable Self-Reproducing Minimal Cells: Toward Artificial Living Systems
2020 - 2023 Non-Equilibrium Thermodynamic Conditions for Emergence of Life Revealed by Minimal Cells
2016 - 2020 Understanding of cell migration dynamics through molecular and genetic simulations
2015 - 2020 Shape change of vesicle induced by the development of softmatter function
2016 - 2019 Road from vesicles to protocells: metabolism, information, thermodynamics
2013 - 2016 Physics of development from molecular assembly to protocell
2012 - 2016 Polymer crystallization and molecular recognition; First principle design based on universality and specificity
2012 - 2015 Formation and change of ordered structures by functional expression in biological system
2010 - 2014 Coupling between Deformations of Vesicle and Chemical Stimuli: Approach from Soft Matter toward Cellular Life
2008 - 2010 Molecular recognition during crystallization of helical polymers -Toward new computational schemes-
2007 - 2009 Morphology Formation Dynamics of Multi-Component Vesicles
2007 - 2009 Simulation of inclusion complex formation and molecular recognition of cyclodextrin
2006 - 2007 Computer simulation of molecular recognition in self organization of helical polymers
2004 - 2005 Computer simulation of chiral recognition in crystallization of helical polymers
2003 - 2005 Soft Matter Complex Systems as Model Biological Systems
2002 - 2004 Structure Formation in Soft Material System : Structure Formation of Hydrocarbon Chains
2000 - 2002 Molecular Dynamics of Polymer Crystallization-Toward a First-Principle Molecular Design of Polymers-
1998 - 1998 タンパク質物性のマルチカノニカルMC法による研究
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Papers (46):
Julia Tanaka, Kenya Haga, Naohito Urakami, Masayuki Imai, Yuka Sakuma. Temperature dependence of membrane viscosity of ternary lipid GUV with Lo domains. Biophysical Journal. 2025. 124. 5. 818-828
Naohito Urakami, Haruna Shimomasu, Junya Matsumura. Formation of the various types of daisy chains constructed by modified cyclodextrin depending on the bond angle of the modified part linked to alpha-cyclodextrin. MOLECULAR SIMULATION. 2021. 47. 17. 1455-1464
Naohito Urakami, Yuka Sakuma, Toshikaze Chiba, Masayuki Imai. Vesicle deformation and division induced by flip-flop of lipid molecules. Soft Matter. 2021. 17. 37. 8434-8445
Sakuma Yuka, Urakami Naohito, Ogata Yusuke, Nagao Michihiro, Komura Shigeyuki, Kawakatsu Toshihiro, Imai Masayuki. 25aQF-9 Diffusion of Nano-meter Sized Domains on a Vesicle. Meeting abstracts of the Physical Society of Japan. 2009. 64. 2. 248-248