Yasukazu Nakamura

ナカムラヤスカズ | Yasukazu Nakamura

Affiliation and department：
Job title： Professor
Other affiliations (2)：

The Graduate University for Advanced Studies Genetics Program, Graduate Institute for Advanced Studies Professor
Kazusa DNA Research Institute Facility for Genome Informatics Visiting Scientist

Homepage URL (1)： http://ynlab.info/yn/

Research field (3)： Biological, health, and medical informatics , Veterinary medicine , Genomics

Research theme for competitive and other funds (21)：

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Papers (189)：

Hiroto Toyoda, Akiyoshi Tani, Yuko Goto-Koshino, Tomoki Motegi, Mika Sakamoto, Takako Mochizuki, Kei Harada, Tetsuya Kobayashi, Asuka Setoguchi, Yohei Shizuta, et al. Gene expression profiles associated with early relapse during first remission induction in canine multicentric high-grade B-cell lymphoma. The Journal of veterinary medical science. 2024. 86. 1. 18-27
Takeshi Ara, Yuichi Kodama, Toshiaki Tokimatsu, Asami Fukuda, Takehide Kosuge, Jun Mashima, Yasuhiro Tanizawa, Tomoya Tanjo, Osamu Ogasawara, Takatomo Fujisawa, et al. DDBJ update in 2023: the MetaboBank for metabolomics data and associated metadata. Nucleic acids research. 2024. 52. D1. D67-D71
Chihiro Furumizu, Yasuhiro Tanizawa, Yasukazu Nakamura. Genome Annotation Matters: From Genes to Phylogenetic Inferences. Plant & cell physiology. 2023
Takako Mochizuki, Mika Sakamoto, Yasuhiro Tanizawa, Takuro Nakayama, Goro Tanifuji, Ryoma Kamikawa, Yasukazu Nakamura. A practical assembly guideline for genomes with various levels of heterozygosity. Briefings in bioinformatics. 2023. 24. 6
Ken-ichi Kurotani, Hideki Hirakawa, Kenta Shirasawa, Koya Tagiri, Moe Mori, Yasunori Ichihashi, Takamasa Suzuki, Yasuhiro Tanizawa, Yasukazu Nakamura, Sachiko Isobe, et al. Establishing a comprehensive web-based analysis platform for Nicotiana benthamiana genome and transcriptome. bioRxiv. 2023

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MISC (272)：

Ken-Ichi Kurotani, Hideki Hirakawa, Kenta Shirasawa, Yasuhiro Tanizawa, Yasukazu Nakamura, Sachiko Isobe, Michitaka Notaguchi. Genome Sequence and Analysis of Nicotiana benthamiana, the Model Plant for Interactions between Organisms. Plant & cell physiology. 2023. 64. 2. 248-257
森宙史, 藤澤貴智, 東光一, 中村保一, 山田拓司, 松井求, 内山郁夫. 微生物バイオインフォマティクスの最前線マイクロバイオーム研究を先導するハブを目指したMicrobiome Datahubの開発. 日本細菌学雑誌. 2023. 78. 1. 30-30
望月孝子, 坂本美佳, 谷澤靖洋, 中山卓郎, 谷藤吾朗, 神川龍馬, 中村保一. A Practical Guide to Genome Assembly with Varied Levels of Heterozygosity. 日本分子生物学会年会プログラム・要旨集(Web). 2023. 46th
森宙史, 藤澤貴智, 東光一, 中村保一, 山田拓司, 松井求, 内山郁夫. Development of an integrated microbiome database: Microbiome Datahub. 日本細菌学雑誌(Web). 2023. 78. 1
中村保一. 非モデル生物のシークエンス解析・インフォマティクス解析. 日本植物学会大会研究発表記録(CD-ROM). 2023. 87th

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Lectures and oral presentations (300)：

Advancements in Nucleotide Sequencing and Genome Analysis: Updates from the DNA Data Bank of Japan
(The 8th Big Data Forum for Life and Health Sciences (Beijing) 2023)
非モデル生物のシークエンス解析・インフォマティクス解析
(日本植物学会大会(札幌)シンポジウム 2023)
DNA Data Bank of Japan update report
(The 19th Asian Bioinformatics Consortium Symposium 2022)
第3回コンパニオンアニマルのゲノム医療研究会(主催)
(第3回コンパニオンアニマルのゲノム医療研究会 2022)
生命情報科学による高度先進獣医療
(千葉市科学館大人が楽しむ科学教室2022 2022)

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Education (3)：

1994 - 1996 The Graduate University for Advanced Studies Faculty of Lifescience Department of Genetics
1989 - 1991 Kyoto University Graduate School of Agriculture Department of Agricultual Technology
1985 - 1989 Shinshu University Faculty of Agriculture Department of Agricultural Technology

Professional career (1)：

Work history (7)：

2009/01 - 現在 Kazusa DNA Research Institute Visiting Scientist
2009/01 - 現在 The Graduate University for Advanced Studies School of Life Science Department of Genetics Professor
2009/01 - 現在 National Institute of Genetics Genome Informatics Laboratory Professor
2006/04 - 2008/12 Kazusa DNA Research Institute Laboratory of Plant Genome Informatics Head of Laboratory
2003/04 - 2008/12 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology Visiting Associate Professor

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Committee career (5)：

2023/05 - 現在 The Genome Taxonomy Database (GTDB) Scientific Advisory Board member
2021/12 - 現在 NARO Core Technology Research Headquarters External Review Committee Member
2020/01 - 現在 China National Genomics Data Center's Scientific Advisory Board Scientific Advisor
2019/04 - 現在 RIKEN BioResource Research Center Resource Committee of Information
2018/04 - 現在 National BioResource Project - Algae Steering committee member

Association Membership(s) (3)：

Japanese Society for Bioinformatics , Society of Genome Microbiology, Japan , The Molecular Biology Society of Japan

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