Research theme for competitive and other funds (2):
2021 - 2023 GPUを用いたオミックスデータの高速解析基盤開発
アプリケーションミドルウェアの開発
Papers (21):
Satoshi Ito, Kenji Ono, Satoru Miyano. Large-scaleWGS Analysis on the supercomputer Fugaku. Proceedings of the 2024 14th International Conference on Bioscience, Biochemistry and Bioinformatics. 2024
Satoshi Ito, Satoru Miyano, Kenji Ono. Acceleration of BAM I/O on distributed file systems. 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). 2023. 3299-3304
Masahiro Kanai, Shea J. Andrews, Mattia Cordioli, Christine Stevens, Benjamin M. Neale, Mark Daly, Andrea Ganna, Gita A. Pathak, Akiko Iwasaki, Juha Karjalainen, et al. A second update on mapping the human genetic architecture of COVID-19. Nature. 2023. 621. 7977. E7-E26
Qingbo S Wang, Ryuya Edahiro, Ho Namkoong, Takanori Hasegawa, Yuya Shirai, Kyuto Sonehara, Hiromu Tanaka, Ho Lee, Ryunosuke Saiki, Takayoshi Hyugaji, et al. The whole blood transcriptional regulation landscape in 465 COVID-19 infected samples from Japan COVID-19 Task Force. Nature communications. 2022. 13. 1. 4830-4830
Ho Namkoong, Ryuya Edahiro, Tomomi Takano, Hiroshi Nishihara, Yuya Shirai, Kyuto Sonehara, Hiromu Tanaka, Shuhei Azekawa, Yohei Mikami, Ho Lee, et al. DOCK2 is involved in the host genetics and biology of severe COVID-19. Nature. 2022. 609. 7928. 754-760