Rchr
J-GLOBAL ID:201301008634366972   Update date: Jul. 19, 2024

Saito Shinji

サイトウ シンジ | Saito Shinji
Affiliation and department:
Job title: 教授
Homepage URL  (1): http://dyna.ims.ac.jp/shinji/index.html
Research field  (1): Basic physical chemistry
Research keywords  (12): Glass transition ,  Single-molecule reaction ,  Enzymatic reaction ,  水 ,  Fluctuation and relaxation ,  化学反応 ,  Higher-order nonlinear vibrational spectroscopy ,  分子シミュレーション ,  Dynamic heterogeneity ,  多時間相関関数 ,  過冷却水 ,  相転移ダイナミクス
Research theme for competitive and other funds  (27):
  • 2021 - 2026 Theoretical study of efficient excitation energy transfer in light-harvesting antenna of higher plants
  • 2016 - 2021 構造揺らぎ・構造変化に基づく生体分子の機能発現の理論的解明
  • 2018 - 2020 水の局所構造と水素結合ダイナミクス:過冷却水と二成分液体
  • 2014 - 2018 Theoretical investigation of excitation energy transfer in biomolecular systems with molecular simulation
  • 2014 - 2017 Broadband spectral measurements on liquid water with oxygen-isotopes from megahertz to mid-infrared region
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Papers (60):
  • Shin-ichi Koda, Shinji Saito. A Flat-bottom Elastic Network Model for Generating Improved Plausible Reaction Paths. 2024
  • Yoshihiko Furuike, Yasuhiro Onoue, Shinji Saito, Toshifumi Mori, Shuji Akiyama. The priming phosphorylation of KaiC is activated by the release of its autokinase autoinhibition. 2024
  • Junichi Ono, Yoshihiro Matsumura, Toshifumi Mori, Shinji Saito. Conformational Dynamics in Proteins: Entangled Slow Fluctuations and Nonequilibrium Reaction Events. The Journal of Physical Chemistry B. 2023
  • Toshifumi Mori, Shinji Saito. Molecular Insights into the Intrinsic Dynamics and Their Roles During Catalysis in Pin1 Peptidyl-prolyl Isomerase. The Journal of Physical Chemistry B. 2022
  • Yoshihiko Furuike, Atsushi Mukaiyama, Shin-ichi Koda, Damien Simon, Dongyan Ouyang, Kumiko Ito-Miwa, Shinji Saito, Eiki Yamashita, Taeko Nishiwaki-Ohkawa, Kazuki Terauchi, et al. Regulation mechanisms of the dual ATPase in KaiC. Proceedings of the National Academy of Sciences. 2022. 119. 19
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MISC (23):
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Lectures and oral presentations  (21):
  • Supercooled water: Structure, dynamics, thermodynamics, and glass transition
    (Pacifichem 2021 2021)
  • Excitation energy transfer in the Fenna-Matthews-Olson protein optimized by site-dependent fluctuations", Symposium on Frontiers in quantum and classical molecular dynamics for complex systems, Pacifichem 2020, Honolulu, USA, Dec. 18 (2021).
    (Pacifichem 2021 2021)
  • Excitation energy transfer in the Fenna-Matthews-Olson protein optimized by site-dependent fluctuations
    (Pacifichem 2021 2021)
  • サイト依存ゆらぎによるFMOタンパク質の率的励起エネルギー移動
    (名古屋大学化学科セミナー 2021)
  • Role of fluctuation in biomolecular function: Molecular origin of efficient excitation energy transfer in the Fenna-Matthews-Olson protein
    (8th French-Japanese Workshop on Computational Methods in Chemistry 2020)
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Education (3):
  • 1995 - 1995 The Graduate University for Advanced Studies
  • 1988 - 1990 Kyoto University Graduate School of Engineering Department of Molecular Engineering
  • - 1988 Keio University Faculty of Science and Technology Department of Chemistry
Professional career (1):
  • 博士(理学)論文博士 (総合研究大学院大学)
Work history (3):
  • 2005/10 - 現在 Institute for Molecular Science Department of Theoretical and Computational Molecular Science Professor
  • 1998/04 - 2005/09 Nagoya University Graduate School of Science, Division of Material Science
  • 1994/04 - 1998/03 Nagoya University School of Science, Department of Chemistry
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