J-GLOBAL ID:201410004703257001   Research Resource code:NBDC00743 Update date:Jun. 17, 2013

UMASS Amherst Yeast snoRNA Database

UMASS Amherst Yeast snoRNA Database
Owning Organization:
  • University of Massachusetts Amherst
Resource classification: Database
Tag (subject)  (1): RNA
Tag (data type)  (3): Phenotype ,  Sequence ,  Classification
Species (1): Saccharomyces cerevisiae (NCBI Taxonomy ID: 4932)
The yeast snoRNA database is a comprehensive database for small nucleolar RNAs (snoRNAs) from the yeast Saccharomyces cerevisiae. It allows to visualize the positions of pseudouridines, 2'-O-methylations, and base methylations in three-dimensional space in the ribosome and also in linear and secondary structure formats of ribosomal RNA. It provides additional perspective on where the modifications occur relative to functional regions within the rRNA and relative to other nearby modifications.
The database also includes details of the base pairing of snoRNAs with target RNAs, genomic organization of the yeast snoRNA genes, and information on corresponding snoRNAs and modifications in other model organisms.
Source: NBDC

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