Rsrc
J-GLOBAL ID:201410010792557102   Research Resource code:NBDC00676 Update date:Jun. 20, 2014

SALAD Database: Surveyed conserved motif ALignment diagram and the Associating Dendrogram

SALAD Database: Surveyed conserved motif ALignment diagram and the Associating Dendrogram
Resource classification: Database
Tag (subject)  (1): Protein
Tag (data type)  (2): Sequence ,  Classification
Species (1): Oryza sativa (NCBI Taxonomy ID: 4530)
Overview:
The SALAD database supports the construction of dendrograms from amino acid sequence similarities in plants, clustering them into proteins with similar functions. This database has following functions;

1) Conserved domains (motifs) can be displayed graphically,

2) annotations between plant species can be compared easily

3) similar annotations can be clustered

4) molecular evolutionary trees can be constructed easily per conserved motif.

The database uses non-redundant complete genomic information for the analysis, and an amino acid displacement matrix for clustering. The most current version supports comparisons of up to 10 plant species.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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