J-GLOBAL ID:201410027795801543   Research Resource code:NBDC00840 Update date:Jun. 01, 2023

CSDB: Carbohydrate Structure Database

CSDB: Carbohydrate Structure Database
Owning Organization:
  • Russian Academy of Sciences
Resource classification: Data,Database
Tag (subject)  (1): Carbohydrate
Tag (data type)  (3): Bibliography/Documents ,  Taxonomy ,  Chemical structure
Species (4): Bacteria (NCBI Taxonomy ID: 2) ,  Archaea (NCBI Taxonomy ID: 2157) ,  Viridiplantae (NCBI Taxonomy ID: 33090) ,  Fungi (NCBI Taxonomy ID: 4751)
This is a regularly updated manually curated database for natural carbohydrates. It aims at high-quality content and provides structural, bibliographic, taxonomic, NMR-spectroscopic and other related information on prokaryotic, plant and fungal glycans, glycopolymers, and glycoconjugates. The coverage in bacterial domain (and soon expected in fungal domain) is about 90% of all published structures. As of 2017, the database contains ~19000 structures from ~9000 organisms published in ~7000 papers, and ~8000 NMR spectra. Besides data, CSDB serves as a platform for numerous glyco-services, such as glycosyltransferase subdatabase, 1D and 2D NMR simulation, automated NMR-based structure elucidation, carbohydrate-based taxon clustering, distribution of structural fragments against taxa, and other. All data can be exported as RDF feeds.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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