J-GLOBAL ID:201410029005389667   Research Resource code:NBDC00598 Update date:Jun. 17, 2013

Noncoding RNA database

Noncoding RNA database
Owning Organization:
  • Poznan University
Resource classification: Data,Database
Tag (subject)  (1): RNA
Tag (data type)  (1): Sequence
Species (3): Bacteria (NCBI Taxonomy ID: 2) ,  Archaea (NCBI Taxonomy ID: 2157) ,  Eukaryota (NCBI Taxonomy ID: 2759)
This database is a collection of information associated with the sequence and function of non-coding RNA. There are over 30,000 sequences spanning a total of 99 species from Bacteria, Archaea, and Eukaryota. Sequence information is obtained from GenBank, annotations are obtained from FANTOM3 (mouse) and H-invitational Integrated Database (humans), while the genome mapping information uses the UCSC genome browser. The sequences and annotations of small cytoplasmic RNAs from bacteria is obtained from the Rfam database. This database does not include microRNA, snoRNA, and housekeeping RNAs such as rRNA, tRNA, snRNA, and SPR RNA.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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